RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SRMSQ9H3Y6 488 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 ACOT13Q9NPJ3 140 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 SPRR3Q9UBC9 169 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 L3MBTL1Q9Y468 752 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 KIF26BQ2KJY2 2108 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 IGLV7-46A0A075B6I9 117 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 A0A1W2PQL4 384 aaPredicted RBP2.25□□□□□ -2.05
CHD1-201ENST00000284049 HSD11B1P28845 292 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 DLX1P56177 255 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 TAS2R39P59534 338 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 LRRC36Q1X8D7 754 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 NEXN-AS1Q8NBZ9 246 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 OR4P4Q8NGL7 312 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 OVOL2Q9BRP0 275 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 WRAP73Q9P2S5 460 aaPredicted RBP2.25□□□□□ -2.05
CHD1-201ENST00000284049 KIAA1217Q5T5P2 1943 aa2.25□□□□□ -2.05
CHD1-201ENST00000284049 PRAC2D3DTV9 90 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 NDUFC2-KCTD14E9PQ53 114 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CLDN34H7C241 214 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 UPK1BO75841 260 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 C1QL1O75973 258 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 ALPLP05186 524 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 MMP7P09237 267 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 PGAM2P15259 253 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 RPL12P30050 165 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 RPL14P50914 215 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 NCBP2P52298 156 aaKnown RBP eCLIP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SLC25A1P53007 311 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CD164Q04900 197 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 Q0VFX4 171 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 KRR1Q13601 381 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 C1DQ13901 141 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SMCO1Q147U7 214 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 ODF3L2Q3SX64 289 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 SPIN4Q56A73 249 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 N4BP2L1Q5TBK1 243 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 OPN5Q6U736 354 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 HSD17B13Q7Z5P4 300 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 NFE4Q86UQ8 179 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 RHOXF1Q8NHV9 184 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 Q8WTZ3 238 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 YIPF6Q96EC8 236 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 GMPPAQ96IJ6 420 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SIGMAR1Q99720 223 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 KLHDC3Q9BQ90 382 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 FNDC4Q9H6D8 234 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 CWH43Q9H720 699 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 RGS18Q9NS28 235 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 MYH4Q9Y623 1939 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 PIKFYVEQ9Y2I7 2098 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 C12orf77C9JDV5 145 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 E9PQ18 207 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 PHYHO14832 338 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 SLC25A27O95847 323 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 APOC1P02654 83 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CD3GP09693 182 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CT62P0C5K7 136 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CCNE1P24864 410 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 PSMB5P28074 263 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 IDH3GP51553 393 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 MXD1Q05195 221 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 TMEM176BQ3YBM2 270 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 RBMXL3Q8N7X1 1067 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SMIM8Q96KF7 97 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SMIM14Q96QK8 99 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 HSD17B10Q99714 261 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 AIF1LQ9BQI0 150 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 DDA1Q9BW61 102 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 TM2D1Q9BX74 207 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 ERVW-1Q9UQF0 538 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 KLF12Q9Y4X4 402 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 ALG5Q9Y673 324 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CYB5R3P00387 301 aaPredicted RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 SERPINA7P05543 415 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CRHP06850 196 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 MELTFP08582 738 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 PRTN3P24158 256 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 APLNRP35414 380 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 BATFQ16520 125 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CD200R1LQ6Q8B3 271 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 OR2L5Q8NG80 312 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 OR13G1Q8NGZ3 307 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 TMEM54Q969K7 222 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 DDIT4LQ96D03 193 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 GABRG3Q99928 467 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 SPRY4Q9C004 299 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 TXNIPQ9H3M7 391 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 FGF22Q9HCT0 170 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 NCBP2LA6PVI3 153 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 MOSP00540 346 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 SNRPAP09012 282 aaKnown RBP2.24□□□□□ -2.05
CHD1-201ENST00000284049 CT45A6P0DMU7 189 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CT45A5P0DMU8 189 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 CT45A7P0DMV0 189 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 OR13C7P0DN81 318 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 INPP1P49441 399 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 DSCR9P59020 149 aa2.24□□□□□ -2.05
CHD1-201ENST00000284049 SPCS3P61009 180 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms