RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 OR2AK2Q8NG84 335 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 OR2T35Q8NGX2 323 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 CCDC107Q8WV48 283 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 DMRTA2Q96SC8 542 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 FAAP24Q9BTP7 215 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 IGKV1D-8A0A087WSZ0 117 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 GEMIN2O14893 280 aaKnown RBP17.96■□□□□ 0.47
YBX3-202ENST00000279550 IFNA6P05013 189 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 DNASE1P24855 282 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 NPBWR2P48146 333 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 IDH3GP51553 393 aaPredicted RBP17.96■□□□□ 0.47
YBX3-202ENST00000279550 DAZAP2Q15038 168 aaPredicted RBP17.96■□□□□ 0.47
YBX3-202ENST00000279550 ACTBL2Q562R1 376 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 SPATA46Q5T0L3 261 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 CXorf67Q86X51 503 aaPredicted RBP17.96■□□□□ 0.47
YBX3-202ENST00000279550 UXS1Q8NBZ7 420 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 CSNK2A3Q8NEV1 391 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 BOD1Q96IK1 185 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 PLEKHJ1Q9NW61 149 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 MEMO1Q9Y316 297 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 USP24Q9UPU5 2620 aa17.96■□□□□ 0.47
YBX3-202ENST00000279550 ZNF780AO75290 641 aaPredicted RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 OR2A4O95047 310 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 GIPP09681 153 aaPredicted RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 GPM6AP51674 278 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 SNU13P55769 128 aaKnown RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 UBE2NP61088 152 aaKnown RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 CEACAM21Q3KPI0 293 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 TMEM211Q6ICI0 200 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 ZNF474Q6S9Z5 364 aaPredicted RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 SLC25A42Q86VD7 318 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 ZDHHC22Q8N966 263 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 OR5H2Q8NGV7 314 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 OR2A7Q96R45 310 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 SULT4A1Q9BR01 284 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 OPA3Q9H6K4 179 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 AK3Q9UIJ7 227 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 H3BUI4 141 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 GOSR2O14653 212 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 PDCD1Q15116 288 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 TBC1D28Q2M2D7 210 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 DCAF12L2Q5VW00 463 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 BRICD5Q6PL45 260 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 CCDC36Q8IYA8 594 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 WDR31Q8NA23 367 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 ADAD2Q8NCV1 583 aaKnown RBP17.95■□□□□ 0.46
YBX3-202ENST00000279550 OR13G1Q8NGZ3 307 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 MARCH1Q8TCQ1 289 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 DYRK2Q92630 601 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 RND1Q92730 232 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 PIGMQ9H3S5 423 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 SLA2Q9H6Q3 261 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 HSF4Q9ULV5 492 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 OSGIN2Q9Y236 505 aa17.95■□□□□ 0.46
YBX3-202ENST00000279550 ZNF732B4DXR9 585 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 RBM11P57052 281 aaKnown RBP17.94■□□□□ 0.46
YBX3-202ENST00000279550 H2BFSP57053 126 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 DHRS2Q13268 280 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 ARL6IP1Q15041 203 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 PPA1Q15181 289 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 IGFBP7Q16270 282 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 OR2T2Q6IF00 324 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 ZSCAN4Q8NAM6 433 aaPredicted RBP17.94■□□□□ 0.46
YBX3-202ENST00000279550 OR10AD1Q8NGE0 317 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 SLAMF9Q96A28 289 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 ST3GAL6Q9Y274 331 aa17.94■□□□□ 0.46
YBX3-202ENST00000279550 A8MXE2 369 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 EEF1E1-BLOC1S5C9J1V9 151 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 SDCBPO00560 298 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 ATXN7O15265 892 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 AGFG2O95081 481 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 ZNF35P13682 527 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 HOXB1P14653 301 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 BCL3P20749 454 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 IL32P24001 234 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 ZBTB25P24278 435 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 C12orf45Q8N5I9 185 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 OR5P3Q8WZ94 311 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 HS3ST6Q96QI5 342 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 C1QTNF6Q9BXI9 259 aa17.93■□□□□ 0.46
YBX3-202ENST00000279550 ZNF701Q9NV72 531 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 RP1L1Q8IWN7 2480 aaPredicted RBP17.93■□□□□ 0.46
YBX3-202ENST00000279550 SMG1Q96Q15 3661 aaKnown RBP17.92■□□□□ 0.46
YBX3-202ENST00000279550 F8VVB4 439 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 F8VWA3 439 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 SMPD2O60906 423 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 HOXC12P31275 282 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 HAAOP46952 286 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 RAP2BP61225 183 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 ERVS71-1P61550 626 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
YBX3-202ENST00000279550 PPP1R1AQ13522 171 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 MRGPRGQ86SM5 289 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 C17orf78Q8N4C9 275 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 ARRDC1Q8N5I2 433 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 TERB2Q8NHR7 220 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 MRPS24Q96EL2 167 aaKnown RBP17.92■□□□□ 0.46
YBX3-202ENST00000279550 CCDC120Q96HB5 630 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 CDH20Q9HBT6 801 aa17.92■□□□□ 0.46
YBX3-202ENST00000279550 NPY4RP50391 375 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms