RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ERVH48-1M5A8F1 160 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 MSTNO14793 375 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 PPP3CBP16298 524 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ZBTB25P24278 435 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 FXYD4P59646 89 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 TEX261Q6UWH6 196 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 TMEM17Q86X19 198 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 WBP1Q96G27 269 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 GMPPAQ96IJ6 420 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-201ENST00000279247 FAM210AQ96ND0 272 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ALX4Q9H161 411 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-201ENST00000279247 C5orf66Q9H5L9 145 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 U3KQ87 197 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 OR5H14A6NHG9 310 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ZDHHC23Q8IYP9 409 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ZSCAN4Q8NAM6 433 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-201ENST00000279247 OR5AP2Q8NGF4 316 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 NEK7Q8TDX7 302 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 SPSB4Q96A44 273 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 HIST1H2AAQ96QV6 131 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF2Q9BSG1 426 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-201ENST00000279247 ARL6Q9H0F7 186 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 HEXA-AS1Q9H8Q6 139 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 CACNA1DQ01668 2161 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 SYNGR1O43759 233 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 OPCMLQ14982 345 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 ZADH2Q8N4Q0 377 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 TRAF4Q9BUZ4 470 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-201ENST00000279247 SELEP16581 610 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 RBMXP38159 391 aaKnown RBP15.43■□□□□ 0.06
CAPN1-201ENST00000279247 TFAP2EQ6VUC0 442 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 FAM214BQ7L5A3 538 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 C17orf78Q8N4C9 275 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 PHB2Q99623 299 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 PLSCR5A0PG75 271 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 PDGFAP04085 211 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 ZBTB37Q5TC79 503 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 ZDHHC22Q8N966 263 aa15.43■□□□□ 0.06
CAPN1-201ENST00000279247 CHMP1AQ9HD42 196 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-201ENST00000279247 ADAP1O75689 374 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 EIF2S3P41091 472 aaKnown RBP15.42■□□□□ 0.06
CAPN1-201ENST00000279247 SEC61A1P61619 476 aaKnown RBP15.42■□□□□ 0.06
CAPN1-201ENST00000279247 EXOSC2Q13868 293 aaKnown RBP15.42■□□□□ 0.06
CAPN1-201ENST00000279247 NANOS1Q8WY41 292 aaKnown RBP15.42■□□□□ 0.06
CAPN1-201ENST00000279247 OR2J1Q9GZK6 312 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 RDH8Q9NYR8 311 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 CLCF1Q9UBD9 225 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 CHATP28329 748 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 CBX5P45973 191 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 TAS2R46P59540 309 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 ARRDC1Q8N5I2 433 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 FZR1Q9UM11 496 aa15.42■□□□□ 0.06
CAPN1-201ENST00000279247 ANKRD30BLA7E2S9 258 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 MCRIP1C9JLW8 97 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 TBPP20226 339 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 RTP5Q14D33 572 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 ALKBH6Q3KRA9 238 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 VAX1Q5SQQ9 334 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 AADACL3Q5VUY0 350 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 SLC22A25Q6T423 547 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 TMEM230Q96A57 120 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 ITGB1BP2Q9UKP3 347 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 TGFBR3Q03167 851 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF175Q9Y473 711 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 IGHG3P01860 377 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 OR5H8P0DN80 308 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 NAT1P18440 290 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 RBM11P57052 281 aaKnown RBP15.41■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF767PQ75MW2 155 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 OVCH2Q7RTZ1 564 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 OR5M8Q8NGP6 311 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 PPP1R1CQ8WVI7 109 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 SARAFQ96BY9 339 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 MARS2Q96GW9 593 aaKnown RBP15.41■□□□□ 0.06
CAPN1-201ENST00000279247 CDH20Q9HBT6 801 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 GPR132Q9UNW8 380 aa15.41■□□□□ 0.06
CAPN1-201ENST00000279247 PTPRQQ9UMZ3 2332 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 POM121CA8CG34 1229 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 MPTX1A8MV57 137 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 IKZF1Q13422 519 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 TBC1D28Q2M2D7 210 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ACTBL2Q562R1 376 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 CLEC18BQ6UXF7 455 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 RPRMLQ8N4K4 120 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 MFFQ9GZY8 342 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 OPN3Q9H1Y3 402 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-201ENST00000279247 MTCH1Q9NZJ7 389 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 COMMD9Q9P000 198 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ANXA10Q9UJ72 324 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 FCGR3AP08637 254 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 KIR2DL2P43627 348 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF169Q14929 603 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ALKAL2Q6UX46 152 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 SNIP1Q8TAD8 396 aaKnown RBP15.4■□□□□ 0.06
CAPN1-201ENST00000279247 LIME1Q9H400 295 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ATPIF1Q9UII2 106 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 ATRXP46100 2492 aa15.4■□□□□ 0.06
CAPN1-201ENST00000279247 HOXB5P09067 269 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 PRKACAP17612 351 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 SERPINF1P36955 418 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms