RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 SUCLG1P53597 346 aaKnown RBP10.96□□□□□ -0.66
UBXN4-201ENST00000272638 LSM6P62312 80 aaKnown RBP10.96□□□□□ -0.66
UBXN4-201ENST00000272638 PMP22Q01453 160 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 GGNBP1Q5YKI7 109 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 TMEM182Q6ZP80 229 aaPredicted RBP10.96□□□□□ -0.66
UBXN4-201ENST00000272638 ZSCAN4Q8NAM6 433 aaPredicted RBP10.96□□□□□ -0.66
UBXN4-201ENST00000272638 NINJ1Q92982 152 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 EDEM2Q9BV94 578 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 USP34Q70CQ2 3546 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 CFAP54Q96N23 3096 aa10.96□□□□□ -0.66
UBXN4-201ENST00000272638 OR6C6A6NF89 314 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 LYZL6O75951 148 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 IGHV3-13P01766 116 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 IGHV3-7P01780 117 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 FPR2P25090 351 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 MRPL49Q13405 166 aaKnown RBP10.95□□□□□ -0.66
UBXN4-201ENST00000272638 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 LYZL2Q7Z4W2 148 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 OR6K3Q8NGY3 331 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 HAS2Q92819 552 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
UBXN4-201ENST00000272638 CHRNA10Q9GZZ6 450 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 C5orf66Q9H5L9 145 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ZNF816-ZNF321PA0A0X1KG74 233 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 OR2A4O95047 310 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 IGHEP01854 428 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 SERPINA7P05543 415 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ID4P47928 161 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
UBXN4-201ENST00000272638 OR2A7Q96R45 310 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ZNF581Q9P0T4 197 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 CELSR3Q9NYQ7 3312 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 FGF5P12034 268 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 CPNE4Q96A23 557 aaPredicted RBP10.95□□□□□ -0.66
UBXN4-201ENST00000272638 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
UBXN4-201ENST00000272638 CHST5Q9GZS9 411 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 TMEM38BQ9NVV0 291 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ANXA10Q9UJ72 324 aa10.95□□□□□ -0.66
UBXN4-201ENST00000272638 ABCA1O95477 2261 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 OR2A2Q6IF42 318 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 SVBPQ8N300 66 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 E9PLN8 166 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 S100A9P06702 114 aaKnown RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 NOVA1P51513 510 aaKnown RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 ZXDAP98168 799 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 PRDX4Q13162 271 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 ENDOGQ14249 297 aaKnown RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 SHEQ5VZ18 495 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 MRPL14Q6P1L8 145 aaKnown RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 LGI3Q8N145 548 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 KCNE4Q8WWG9 221 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 INTS12Q96CB8 462 aaKnown RBP10.94□□□□□ -0.66
UBXN4-201ENST00000272638 TAAR9Q96RI9 348 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 SLC25A32Q9H2D1 315 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 GPR35Q9HC97 309 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 TBPP20226 339 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 NPBWR2P48146 333 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 MPPED2Q15777 294 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 LHFPL2Q6ZUX7 228 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 BVESQ8NE79 360 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 M1APQ8TC57 530 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 TRIB1Q96RU8 372 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 ANGPTL4Q9BY76 406 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 FBXL17Q9UF56 701 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
UBXN4-201ENST00000272638 A0A0A6YYD4 124 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SMCO3A2RU48 225 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TMEM14DPA8MWL7 114 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 KLF7O75840 302 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 MT-CO3P00414 261 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SSPNQ14714 243 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 HES3Q5TGS1 186 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TIPARPQ7Z3E1 657 aaKnown RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 OR2H1Q9GZK4 316 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 IGLV3-12A0A075B6K2 115 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 C1QL1O75973 258 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 NGFP01138 241 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FUT3P21217 361 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ANOS1P23352 680 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 GABRA2P47869 451 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 MEOX1P50221 254 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SMUG1Q53HV7 270 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms