RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CCRL2O00421 344 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 TMPRSS2O15393 492 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 CYB5AP00167 134 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 SFTPBP07988 381 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 ZNF93P35789 620 aaPredicted RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 IKZF1Q13422 519 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 HSD17B12Q53GQ0 312 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 ESCO2Q56NI9 601 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 WDR25Q64LD2 544 aaPredicted RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 EMG1Q92979 244 aaKnown RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 NR1H4Q96RI1 486 aaPredicted RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 SSBP3Q9BWW4 388 aaPredicted RBP10.61□□□□□ -0.71
SS18-202ENST00000269138 MMP26Q9NRE1 261 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 KAAG1Q9UBP8 84 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 OR14J1Q9UGF5 321 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 MTORP42345 2549 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 MALRD1Q5VYJ5 2156 aa10.61□□□□□ -0.71
SS18-202ENST00000269138 ARHGAP32A7KAX9 2087 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 TRIM64CA6NLI5 447 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 DVL1O14640 695 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 KDM4BO94953 1096 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 CDRT1O95170 752 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 SRMP19623 302 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 DUSP1P28562 367 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 PRDX2P32119 198 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 PTGFRP43088 359 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 SNU13P55769 128 aaKnown RBP10.6□□□□□ -0.71
SS18-202ENST00000269138 GNB2P62879 340 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 DGUOKQ16854 277 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 CD200R1LQ6Q8B3 271 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 LYPD6Q86Y78 171 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 FAM58AQ8N1B3 248 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 JAGN1Q8N5M9 183 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 OR10K1Q8NGX5 313 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 TMEM186Q96B77 213 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 FAM192AQ9GZU8 254 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 CNTD2Q9H8S5 307 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 TCF7L1Q9HCS4 588 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 HIF1ANQ9NWT6 349 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 CLN8Q9UBY8 286 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 ING4Q9UNL4 249 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 MAB21L2Q9Y586 359 aa10.6□□□□□ -0.71
SS18-202ENST00000269138 TRDV1A0A1B0GX56 115 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 A8MV72 311 aaPredicted RBP10.59□□□□□ -0.71
SS18-202ENST00000269138 A8MXK9 166 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 FOXH1O75593 365 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 KNG1P01042 644 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 PRKACAP17612 351 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 CPT2P23786 658 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 DVL1P1P54792 670 aaPredicted RBP10.59□□□□□ -0.71
SS18-202ENST00000269138 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 SLC36A1Q7Z2H8 476 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 GLCCI1Q86VQ1 547 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 PXT1Q8NFP0 134 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 PHYHIPQ92561 330 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
SS18-202ENST00000269138 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 GFI1Q99684 422 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 ELL3Q9HB65 397 aaPredicted RBP10.59□□□□□ -0.71
SS18-202ENST00000269138 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
SS18-202ENST00000269138 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 SHISA3A0PJX4 238 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 C22orf46C9J442 243 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 IL13RA1P78552 427 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 PAX2Q02962 417 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 C22orf42Q6IC83 251 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 Q8IYB0 196 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 MED30Q96HR3 178 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 DNTTIP1Q9H147 329 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 OR51E2Q9H255 320 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 KCNS2Q9ULS6 477 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 POLR3KQ9Y2Y1 108 aaPredicted RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.721e-7■■■■□ 26.1
SS18-202ENST00000269138 LOC105371242A0A075B767 164 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 NDUFB3O43676 98 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 ARL6IP5O75915 188 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 HTR3BO95264 441 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 CD36P16671 472 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 JUNBP17275 347 aaPredicted RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 GADD45AP24522 165 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 COL10A1Q03692 680 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 PDCD1Q15116 288 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 RSU1Q15404 277 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms