RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 LIPGQ9Y5X9 500 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 A0A1W2PPC4 97 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 KCNAB3O43448 404 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 CEACAM5P06731 702 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 DLX1P56177 255 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 POLR2GP62487 172 aaKnown RBP eCLIP13.45□□□□□ -0.26
NID1-201ENST00000264187 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
NID1-201ENST00000264187 CST9Q5W186 159 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 PDPNQ86YL7 162 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 EIF4E3Q8N5X7 224 aaKnown RBP13.45□□□□□ -0.26
NID1-201ENST00000264187 RAB40CQ96S21 281 aa13.45□□□□□ -0.26
NID1-201ENST00000264187 SBK3P0C264 359 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 SUCLG1P53597 346 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 PABPC1L2AQ5JQF8 200 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 CLLU1Q5K131 121 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 B3GNTL1Q67FW5 361 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 DPPA3Q6W0C5 159 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 RNF24Q9Y225 148 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 ZNF32P17041 273 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 ELOBQ15370 118 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 DHRS13Q6UX07 377 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 NUFIP2Q7Z417 695 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 PGA3P0DJD8 388 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 DYNLT3P51808 116 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 ZNF117Q03924 483 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 IGSF11Q5DX21 431 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 C16orf47Q6ZP98 133 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 SSMEM1Q8WWF3 244 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 TECRQ9NZ01 308 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 RP1L1Q8IWN7 2480 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 TUBAL3A6NHL2 446 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 H7C2G1 150 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 TMEM251Q8N6I4 163 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 DOK1Q99704 481 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 SPSB1Q96BD6 273 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 OR4C12Q96R67 309 aa13.44□□□□□ -0.26
NID1-201ENST00000264187 AURKAIP1Q9NWT8 199 aaPredicted RBP13.44□□□□□ -0.26
NID1-201ENST00000264187 TAS2R60P59551 318 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 HLA-DRB3P79483 266 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 ZNF547Q8IVP9 402 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 ZNF71Q9NQZ8 489 aaPredicted RBP13.43□□□□□ -0.26
NID1-201ENST00000264187 KNTC1P50748 2209 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 DUXBA0A1W2PPF3 345 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 OR5B21A6NL26 309 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 M0R3E3 92 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 RAB29O14966 203 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 ADAP1O75689 374 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 MPZL1O95297 269 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 ZNF137PP52743 207 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 LIAT1Q6ZQX7 453 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 Q8IYB0 196 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 NTNG2Q96CW9 530 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 NEIL1Q96FI4 390 aaPredicted RBP13.43□□□□□ -0.26
NID1-201ENST00000264187 SNX22Q96L94 193 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 SH2D2AQ9NP31 389 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 CYSLTR2Q9NS75 346 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 CDRT15L2A8MXV6 281 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 RGS13O14921 159 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 TBX19O60806 448 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 MPC2O95563 127 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 MVB12AQ96EY5 273 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 LINC00052Q96N35 136 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 VSIG4Q9Y279 399 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 A0A087X0M5 115 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 A0A1B0GX30 115 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 LINC01565O15544 149 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 SCGB1A1P11684 91 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 MVDP53602 400 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 HERVK_113P61574 105 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 PSG5Q15238 335 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 ZDHHC22Q8N966 263 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 TMEM191AQ9H0A3 160 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 NAA60Q9H7X0 242 aa13.43□□□□□ -0.26
NID1-201ENST00000264187 RALYQ9UKM9 306 aaKnown RBP13.43□□□□□ -0.26
NID1-201ENST00000264187 K7EQS6 105 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 LANCL1O43813 399 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 MT-CO3P00414 261 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 FUT7Q11130 342 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 FAM53BQ14153 422 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 IGFBP7Q16270 282 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 OR1L6Q8NGR2 347 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 M0R143 59 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 AP4M1O00189 453 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 GSTZ1O43708 216 aaPredicted RBP13.42□□□□□ -0.26
NID1-201ENST00000264187 SSX1Q16384 188 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 HLA-BQ31612 363 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 OR4P4Q8NGL7 312 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 MAP1LC3CQ9BXW4 147 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 PCED1AQ9H1Q7 454 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 THYN1Q9P016 225 aa13.42□□□□□ -0.26
NID1-201ENST00000264187 IGHV3-21A0A0B4J1V1 117 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms