RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM27BQ5VT28 67 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 C20orf24Q9BUV8 137 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 GPR87Q9BY21 358 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 PRSS50Q9UI38 385 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SERPINA5P05154 406 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SCRN3Q0VDG4 424 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 DEFB109BQ30KR1 87 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 CPEB3Q8NE35 698 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 URM1Q9BTM9 101 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SLCO5A1Q9H2Y9 848 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF850A8MQ14 1090 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 BPNT1O95861 308 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SP1P08047 785 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 EDN3P14138 238 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 MRPS34P82930 218 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ACOT7LQ6ZUV0 252 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 FER1L6-AS2Q96M78 137 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SMIM3Q9BZL3 60 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ATRXP46100 2492 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 TLN1Q9Y490 2541 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 SLC33A1O00400 549 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 FBXO24O75426 580 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 SNAPC5O75971 98 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 NGFP01138 241 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 DAOP14920 347 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 CD46P15529 392 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 GFRA1P56159 465 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 PIGYQ3MUY2 71 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 SVBPQ8N300 66 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 MOB1AQ9H8S9 216 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 CHD8Q9HCK8 2581 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 ADGRG4Q8IZF6 3080 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 FXYD4P59646 89 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF766Q5HY98 468 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 C10orf128Q5T292 105 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 NEK7Q8TDX7 302 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 APH1AQ96BI3 265 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 OR2H1Q9GZK4 316 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 WNT5BQ9H1J7 359 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
TRAFD1-201ENST00000257604 MEX3AA1L020 520 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 C21orf140B9A014 251 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 SSX5O60225 188 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 OR2F2O95006 317 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 CRYBA1P05813 215 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 CYC1P08574 325 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 LHX2P50458 406 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 RAB13P51153 203 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 SOX8P57073 446 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 OR2F1Q13607 317 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 MICBQ29980 383 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 SLC25A21Q9BQT8 299 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 SPRY4Q9C004 299 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF318Q5VUA4 2279 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF503-AS2A6NEH8 195 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 KLRC4-KLRK1H3BQV0 150 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 NRASP01111 189 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 CD8AP01732 235 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 WT1P19544 449 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 SNRPEP62304 92 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 RAB1AP62820 205 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 RIPPLY1Q0D2K3 151 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 ECH1Q13011 328 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 COL6A6A6NMZ7 2263 aa12.71□□□□□ -0.37
TRAFD1-201ENST00000257604 NCOR2Q9Y618 2525 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 MSGN1A6NI15 193 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 LINC00587B1AMM8 73 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 LDLRAD4O15165 306 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 OR7C1O76099 320 aaPredicted RBP12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 NME2P22392 152 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 S100A10P60903 97 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 TMEM229BQ8NBD8 167 aa12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.38
TRAFD1-201ENST00000257604 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 HIST1H1DP16402 221 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 SERPINF1P36955 418 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 CLDN18P56856 261 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 RAB35Q15286 201 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 OR5H2Q8NGV7 314 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 MRGPRFQ96AM1 343 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms