RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 GSTO2Q9H4Y5 243 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM56-RWDD3S4R434 201 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 GON4LQ3T8J9 2241 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A087WUJ7 227 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 DPRXA6NFQ7 191 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ANKRD30BLA7E2S9 258 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 H3BVH4 76 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2A4O95047 310 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ACTL6AO96019 429 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A6P0DMU7 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A5P0DMU8 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A7P0DMV0 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 HBG1P69891 147 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 HBG2P69892 147 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A1Q5HYN5 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 GFI1BQ5VTD9 330 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CCDC144NLQ6NUI1 221 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 FAHD1Q6P587 224 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 Q6ZSR9 355 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 TRAPPC6BQ86SZ2 158 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SIRT6Q8N6T7 355 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A3Q8NHU0 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2A7Q96R45 310 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 MMP25Q9NPA2 562 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ZDHHC3Q9NYG2 299 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF217O75362 1048 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 YPEL5P62699 121 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ANKRD34AQ69YU3 496 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 BRWD3Q6RI45 1802 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2M3Q8NG83 312 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 ST6GALNAC5Q9BVH7 336 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 POPDC3Q9HBV1 291 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 INSL5Q9Y5Q6 135 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 DOCK1Q14185 1865 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PAPPA2Q9BXP8 1791 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 KBTBD11-OT1A0A1B0GTJ5 212 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 RENP00797 406 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 EMP2P54851 167 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 OR1D5P58170 312 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 COL10A1Q03692 680 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SHBQ15464 509 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 FBXL22Q6P050 247 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 KRTCAP2Q8N6L1 136 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CYB561A3Q8NBI2 242 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 OR8B3Q8NGG8 313 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 MESP1Q9BRJ9 268 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 FRRS1LQ9P0K9 344 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 TSSC4Q9Y5U2 329 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 KCNE1BA0A087WTH5 132 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PTGESO14684 152 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 GALR3O60755 368 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 EDN1P05305 212 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 XCR1P46094 333 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SEC11AP67812 179 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 CSNK1G2P78368 415 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 DUSP2Q05923 314 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 RHBDD2Q6NTF9 364 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 GPR32P1Q8NGA4 272 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SLAMF8Q9P0V8 285 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 DEC1Q9P2X7 70 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 KLK11Q9UBX7 282 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIAL4EA0A075B759 164 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 C9orf172C9J069 976 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIAL4FP0DN26 164 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 TSFMP43897 325 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 C5orf64Q2M2E5 130 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 GAB4Q2WGN9 574 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 MS4A13Q5J8X5 152 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC8B1Q6J4K2 584 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PROKR1Q8TCW9 393 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 NICN1Q9BSH3 213 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 P2RY12Q9H244 342 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 IL23AQ9NPF7 189 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PILRBQ9UKJ0 227 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 DAPP1Q9UN19 280 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 B3GALT5Q9Y2C3 310 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIAL4AQ9Y536 164 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 TIMM10BQ9Y5J6 103 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 MYH15Q9Y2K3 1946 aa6.03□□□□□ -1.44
PDGFRA-201ENST00000257290 IGHV2-70DA0A0C4DH43 119 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 RING1Q06587 406 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 DHRS2Q13268 280 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 TRAT1Q6PIZ9 186 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 TGIF2LYQ8IUE0 185 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 C2CD4AQ8NCU7 369 aaPredicted RBP6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 ADAMTS15Q8TE58 950 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2V2Q96R30 315 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 LPAR4Q99677 370 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 ARHGAP9Q9BRR9 750 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 HCAR1Q9BXC0 346 aa6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 FCF1Q9Y324 198 aaKnown RBP6.02□□□□□ -1.44
PDGFRA-201ENST00000257290 TNFRSF6BO95407 300 aa6.02□□□□□ -1.45
PDGFRA-201ENST00000257290 GCSHP23434 173 aa6.02□□□□□ -1.45
PDGFRA-201ENST00000257290 MVDP53602 400 aa6.02□□□□□ -1.45
PDGFRA-201ENST00000257290 SHHQ15465 462 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms