RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 HES4Q9HCC6 221 aa10.95□□□□□ -0.66
LSM8-201ENST00000249299 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
LSM8-201ENST00000249299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.95□□□□□ -0.66
LSM8-201ENST00000249299 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
LSM8-201ENST00000249299 EXTL2Q9UBQ6 330 aa10.95□□□□□ -0.66
LSM8-201ENST00000249299 RALYQ9UKM9 306 aaKnown RBP10.95□□□□□ -0.66
LSM8-201ENST00000249299 LRRC30A6NM36 301 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 H7C417 338 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 RAB27BO00194 218 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 CDIPTO14735 213 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 SPRY1O43609 319 aaPredicted RBP10.94□□□□□ -0.66
LSM8-201ENST00000249299 ANGPTL7O43827 346 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 CA11O75493 328 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 CLDN1O95832 211 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 MPIG6BO95866 241 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 SFTPBP07988 381 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 ZNF146Q15072 292 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 SPIN3Q5JUX0 258 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 WDR82Q6UXN9 313 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 FAM58AQ8N1B3 248 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 OR4M1Q8NGD0 313 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 OR11L1Q8NGX0 322 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
LSM8-201ENST00000249299 DVL3Q92997 716 aaPredicted RBP10.94□□□□□ -0.66
LSM8-201ENST00000249299 TRAF4Q9BUZ4 470 aaPredicted RBP10.94□□□□□ -0.66
LSM8-201ENST00000249299 RAB1BQ9H0U4 201 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 ATG5Q9H1Y0 275 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 DECR2Q9NUI1 292 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 HSF4Q9ULV5 492 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 NPTNQ9Y639 398 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 V9GYH0 126 aa10.94□□□□□ -0.66
LSM8-201ENST00000249299 SPTAN1Q13813 2472 aaKnown RBP10.94□□□□□ -0.66
LSM8-201ENST00000249299 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 A6NLC8 198 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SULT1C2O00338 296 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SYNGR1O43759 233 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 HTR3BO95264 441 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 LHBP01229 141 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 MELTFP08582 738 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SERPINA2P20848 420 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 CDK2P24941 298 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 EFNB2P52799 333 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 RBM11P57052 281 aaKnown RBP10.93□□□□□ -0.66
LSM8-201ENST00000249299 SMIM21Q3B7S5 101 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 TMEM69Q5SWH9 247 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 HACD4Q5VWC8 232 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 OR10K2Q6IF99 312 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 FAM131AQ6UXB0 335 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 C1orf87Q8N0U7 546 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 OR10R2Q8NGX6 335 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 ITLN1Q8WWA0 313 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SLAMF9Q96A28 289 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 SAP30LQ9HAJ7 183 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 GCM1Q9NP62 436 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 GLS2Q9UI32 602 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 ABCA4P78363 2273 aa10.93□□□□□ -0.66
LSM8-201ENST00000249299 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 SERPINE3A8MV23 424 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 PYCARD-AS1I3L0S3 204 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 GSTZ1O43708 216 aaPredicted RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 PLATP00750 562 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 KNG1P01042 644 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 CD8AP01732 235 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 GSTP1P09211 210 aaKnown RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 IRF2P14316 349 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 BCL3P20749 454 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 PTH2RP49190 550 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 SSBP1Q04837 148 aaKnown RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 MPPED2Q15777 294 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 PNLIPRP3Q17RR3 467 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 DNM1P46Q6ZS02 220 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 ZFAND2BQ8WV99 257 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 GTF3AQ92664 365 aaKnown RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 BORCS5Q969J3 196 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 NKX3-1Q99801 234 aaPredicted RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 CLEC4MQ9H2X3 399 aaPredicted RBP10.92□□□□□ -0.66
LSM8-201ENST00000249299 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 DLL4Q9NR61 685 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 C1orf123Q9NWV4 160 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 RNF7Q9UBF6 113 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 ROS1P08922 2347 aa10.92□□□□□ -0.66
LSM8-201ENST00000249299 A0A1W2PPR1 153 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 RHBDL1O75783 438 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 NXPH2O95156 264 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 HLA-DQB1P01920 261 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 FUT3P21217 361 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 NPBWR2P48146 333 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 TAS2R20P59543 309 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 CCL8P80075 99 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 IL18Q14116 193 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 ZNF79Q15937 498 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 PRAMEF6Q5VXH4 476 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 CHST4Q8NCG5 386 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 OR10K1Q8NGX5 313 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms