RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 C22orf42Q6IC83 251 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.7■□□□□ 0.743e-6■■■□□ 16.1
HOMER3-201ENST00000221222 LYPD2Q6UXB3 125 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 C1QL2Q7Z5L3 287 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 BATF2Q8N1L9 274 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 JAGN1Q8N5M9 183 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 OR13F1Q8NGS4 319 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 ANGPTL6Q8NI99 470 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 FOXRED1Q96CU9 486 aaPredicted RBP19.7■□□□□ 0.74
HOMER3-201ENST00000221222 NEIL1Q96FI4 390 aaPredicted RBP19.7■□□□□ 0.74
HOMER3-201ENST00000221222 KNG1P01042 644 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 SFTPBP07988 381 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 IGHV4-31P0DP07 118 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 PSG2P11465 335 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 GZMKP49863 264 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 GLT8D1Q68CQ7 371 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 OR5T2Q8NGG2 359 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 FAM192AQ9GZU8 254 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 CNTD2Q9H8S5 307 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 EXOSC4Q9NPD3 245 aaKnown RBP19.7■□□□□ 0.74
HOMER3-201ENST00000221222 RBFOX1Q9NWB1 397 aaKnown RBP19.7■□□□□ 0.74
HOMER3-201ENST00000221222 ZNF222Q9UK12 451 aa19.7■□□□□ 0.74
HOMER3-201ENST00000221222 IGKV1D-17A0A075B6S4 117 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 FAM157AC9JC47 383 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 TFAP2AP05549 437 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 AMY2BP19961 511 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 TIMM50Q3ZCQ8 353 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 ELP2Q6IA86 826 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 GDPGP1Q6ZNW5 385 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 ZNF788Q6ZQV5 615 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 NLRC3Q7RTR2 1065 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 FAM58AQ8N1B3 248 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 Q8NFD4 153 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 EMG1Q92979 244 aaKnown RBP19.69■□□□□ 0.74
HOMER3-201ENST00000221222 CHCHD6Q9BRQ6 235 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 HMG20AQ9NP66 347 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 IL36GQ9NZH8 169 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 GSTK1Q9Y2Q3 226 aa19.69■□□□□ 0.74
HOMER3-201ENST00000221222 HIVEP2P31629 2446 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 ABCA1O95477 2261 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 DOCK11Q5JSL3 2073 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 SHISA3A0PJX4 238 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 ADAM20O43506 726 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 MYL9P24844 172 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 ALDH3B2P48448 385 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 C1orf100Q5SVJ3 147 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 OR8B3Q8NGG8 313 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 OR8B2Q96RD0 313 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 CCL13Q99616 98 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 GFI1Q99684 422 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 SEBOXQ9HB31 216 aaPredicted RBP19.68■□□□□ 0.74
HOMER3-201ENST00000221222 CTSZQ9UBR2 303 aa19.68■□□□□ 0.74
HOMER3-201ENST00000221222 MRPS28Q9Y2Q9 187 aaKnown RBP19.68■□□□□ 0.74
HOMER3-201ENST00000221222 RFPL4AA6NLU0 287 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 B4DSR2 109 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 RFPL4AL1F8VTS6 287 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 TMPRSS2O15393 492 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 BMXP51813 675 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 SEC61A1P61619 476 aaKnown RBP19.67■□□□□ 0.74
HOMER3-201ENST00000221222 KRTAP1-1Q07627 177 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 ZNF146Q15072 292 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 RSU1Q15404 277 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 ZNF841Q6ZN19 808 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 SLC36A1Q7Z2H8 476 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 OR4D6Q8NGJ1 314 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 MSI2Q96DH6 328 aaKnown RBP19.67■□□□□ 0.74
HOMER3-201ENST00000221222 SDSLQ96GA7 329 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 S100A13Q99584 98 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 METTL9Q9H1A3 318 aa19.67■□□□□ 0.74
HOMER3-201ENST00000221222 AK6Q9Y3D8 172 aaKnown RBP19.67■□□□□ 0.74
HOMER3-201ENST00000221222 NKX6-3A6NJ46 265 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 A8MXK9 166 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 PDCD5O14737 125 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 ZNF780AO75290 641 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-201ENST00000221222 CDRT1O95170 752 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 PRKACAP17612 351 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 PITPNBP48739 271 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 MTNR1BP49286 362 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 PSMD7P51665 324 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 FGF12P61328 243 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 ESCO2Q56NI9 601 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 SPIN3Q5JUX0 258 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 FIP1L1Q6UN15 594 aaKnown RBP19.66■□□□□ 0.74
HOMER3-201ENST00000221222 LINC01356Q8N9X3 169 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 TBC1D15Q8TC07 691 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 KCTD7Q96MP8 289 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 GAFA1Q96PS6 74 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 ELL3Q9HB65 397 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-201ENST00000221222 ING4Q9UNL4 249 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 MALRD1Q5VYJ5 2156 aa19.66■□□□□ 0.74
HOMER3-201ENST00000221222 LOC100506127A0A0U1RQW1 187 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 SIGLEC5O15389 551 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 PRDX2P32119 198 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 GABRA2P47869 451 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 NPY4RP50391 375 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 IL13RA1P78552 427 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 CYB5R2Q6BCY4 276 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 AWAT2Q6E213 333 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 GLIPR1L1Q6UWM5 242 aa19.65■□□□□ 0.74
HOMER3-201ENST00000221222 CD177Q8N6Q3 437 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms