RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZNF845Q96IR2 970 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR10C1Q96KK4 312 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR2A5Q96R48 311 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 CDCP1Q9H5V8 836 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TRBV9A0A0B4J1U6 114 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OOEPA6NGQ2 149 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HSPB6O14558 160 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 SLC31A2O15432 143 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 VDAC1P21796 283 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR1D5P58170 312 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM3AP98173 230 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 LRRC10Q5BKY1 277 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 DNLZQ5SXM8 178 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR10A7Q8NGE5 316 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GPBAR1Q8TDU6 330 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 RXFP4Q8TDU9 374 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ACY3Q96HD9 319 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GPX7Q96SL4 187 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 VPS25Q9BRG1 176 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR6C3Q9NZP0 311 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PPP1R3CQ9UQK1 317 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 SPTY2D1-AS1A0A0U1RR47 76 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 A0A1W2PPQ1 181 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 DHHO43323 396 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CRYABP02511 175 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 MT-ND6P03923 174 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ISG15P05161 165 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 RPS4Y1P22090 263 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 HLA-DRB3P79483 266 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SMAGPQ0VAQ4 97 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FABP9Q0Z7S8 132 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PWWP2BQ6NUJ5 590 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 RFLNAQ6ZTI6 216 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 BHLHA9Q7RTU4 235 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TMEM123Q8N131 208 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TMEM104Q8NE00 496 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR5C1Q8NGR4 320 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 IFI44Q8TCB0 444 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 DOK4Q8TEW6 326 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 P2RX4Q99571 388 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 HSD17B10Q99714 261 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 KCNK15Q9H427 330 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GSX1Q9H4S2 264 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZNF768Q9H5H4 540 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 CCL27Q9Y4X3 112 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PCDHGA9Q9Y5G4 932 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 CACNA1DQ01668 2161 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PLXND1Q9Y4D7 1925 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FCMRO60667 390 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SMIM17P0DL12 118 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CD82P27701 267 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SULT1A1P50225 295 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GPM6AP51674 278 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 RUNX2Q13950 521 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR4S2Q8NH73 311 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 EXTL1Q92935 676 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ATG101Q9BSB4 218 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SARGQ9BW04 601 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TPSD1Q9BZJ3 242 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PLAC1Q9HBJ0 212 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PARD6AQ9NPB6 346 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 MBNL1Q9NR56 388 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 SVILO95425 2214 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FAM24AA6NFZ4 105 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ISLRO14498 428 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR2J2O76002 312 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CXorf1O96002 111 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GCGP01275 180 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SP1P08047 785 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ATP5IP56385 69 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 ERVS71-1P61550 626 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZNF750Q32MQ0 723 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CLEC9AQ6UXN8 241 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR2T10Q8NGZ9 312 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 KTI12Q96EK9 354 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 SMIM14Q96QK8 99 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TSPAN32Q96QS1 320 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GPR87Q9BY21 358 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SLC6A13Q9NSD5 602 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZC3H12DA2A288 527 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 SLC22A20A6NK97 555 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 NCBP2LA6PVI3 153 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 TNFSF11O14788 317 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CDKN2AP42771 156 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 PAFAH1B2P68402 229 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZNF117Q03924 483 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PSMG4Q5JS54 123 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TMEM215Q68D42 235 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FAM181AQ8N9Y4 354 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PTP4A1Q93096 173 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ARSGQ96EG1 525 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TINAGL1Q9GZM7 467 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 CHST5Q9GZS9 411 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SLC2A8Q9NY64 477 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms