RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Stx4P70452 298 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Thsd4Q3UTY6 1018 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tsr3Q5HZH2 323 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Prrg4Q8BGN6 226 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1347Q8VF33 319 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 UmodQ91X17 642 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lap3Q9CPY7 519 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Pfdn1Q9CWM4 122 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cldn14Q9Z0S3 239 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Unc119Q9Z2R6 240 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Pde4dipQ80YT7 2224 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 D430019H16RikJ3QPM6 83 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ccr6O54689 367 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 FgrP14234 517 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Camk2bP28652 542 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gpm6aP35802 278 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Wfdc18P62810 74 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Hist1h3aP68433 136 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Hist1h3bP84228 136 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Adgrg5Q3V3Z3 524 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tex261Q62302 196 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1126Q7TR49 314 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1113Q7TR54 326 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cdadc1Q8BMD5 523 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 YbeyQ8CAV0 164 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Las2Q8CB14 526 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr73Q920P2 313 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Steap4Q923B6 470 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Kcnmb4Q9JIN6 210 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Neu3Q9JMH7 418 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Macrod2Q3UYG8 475 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gpr137bQ8BNQ3 385 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ube3dQ8BX13 368 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr994Q8VF73 314 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cela3bQ9CQ52 269 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Arv1Q9D0U9 266 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Fam3bQ9D309 235 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Insl6Q9QY05 191 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rspo1Q9Z132 265 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 A0A286YDG0 184 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Stpg3A2RSX4 306 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr329-psM9MMK4 331 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Klk1b3P00756 261 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ube2mP61082 183 aaKnown RBP13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Thbs3Q05895 956 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lcn4Q62472 185 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Akr1c18Q8K023 323 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn1r183Q8K3N5 305 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Galnt16Q9JJ61 558 aa13.92□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr785A0A0N4SVC3 312 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Fbxw27A0A1D5RLF0 466 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn2r107E9PZJ7 861 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm5799E9Q2M1 201 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Amy2P00688 508 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lire1P11260 357 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Itgb2P11835 771 aaKnown RBP13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Nme1P15532 152 aaKnown RBP13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Anxa11P97384 503 aaKnown RBP13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rsu1Q01730 277 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tas2r116Q7M713 305 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Fndc9Q8BJN4 226 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Slc6a8Q8VBW1 640 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ceacam18Q9D871 376 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Igkv14-126A0A075B5K0 117 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm28897A0A087WP44 222 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm28961A0A087WPA5 222 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Yjefn3F6W8I0 251 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Oprm1P42866 398 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ccdc106Q3ULM0 279 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Klk1b21Q61759 261 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Igsf21Q7TNR6 468 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr479Q7TRV1 327 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rdh9Q8K5C8 317 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mrpl49Q9CQ40 166 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tmem54Q9D7S1 219 aa13.91□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm39566A0A1B0GT45 1251 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tmem182B2RVY9 229 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm5286E0CXI6 357 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ankrd65F6YK91 380 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1218L7MU54 311 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 St8sia2O35696 375 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Pafah1b3Q61205 232 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1216Q7TR05 311 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lrtm1Q8BXQ3 356 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr291Q8VF60 317 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Dnaja3Q99M87 480 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tmem218Q9CQ44 115 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Stra6lQ9DBN1 621 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mlf1Q9QWV4 267 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Dchs1E9PVD3 3291 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Zfp688E9Q5M9 274 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn2r60L7N2A1 853 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm3033M0QWI0 180 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Sc5dO88822 299 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cbr2P08074 244 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 H1f0P10922 194 aaKnown RBP13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mep1aP28825 747 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Agtr1aP29754 359 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 A4gntQ14BT6 341 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tmem104Q3TB48 496 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms