RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mtnd4lP03903 98 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Agtr1bP29755 359 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 GalP47212 124 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 UcnP81615 122 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Slc38a8Q5HZH7 432 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm2aQ60648 193 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Oas1bQ60856 376 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 NarflQ7TMW6 476 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gltpd2Q8K0R6 321 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Tmem19Q91W52 336 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Znf672Q99LH4 468 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Hcfc1r1Q9CYQ5 120 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Arrdc2Q9D668 407 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rpl7l1Q9D8M4 246 aaKnown RBP18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Prkar1aQ9DBC7 381 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ak3Q9WTP7 227 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ubl3Q9Z2M6 117 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 FancmQ8BGE5 2021 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Igkv14-111A0A140T8P9 117 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Pusl1A2ADA5 291 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm20715E9Q3L7 95 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr520E9Q518 316 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Dhrs3O88876 302 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 C1qbP14106 253 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Irf2P23906 349 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rab11bP46638 218 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rab1AP62821 205 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rab3aP63011 220 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Scand1Q2M4I6 142 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 H2-T22Q31615 379 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Trav6-2Q5R1I4 113 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Zfp955aQ80XR7 545 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Fam199xQ8K2D0 388 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gtf2f2Q8R0A0 249 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 ApehQ8R146 732 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 TbccQ8VCN9 341 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1324Q8VEU7 332 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr815Q8VFU0 316 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Spef1Q99JL1 234 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Dnaja3Q99M87 480 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Lhx6Q9R1R0 363 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 G6pc2Q9Z186 355 aa18.42■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Vmn1r68E9Q0V3 319 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Id4P41139 161 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Hsd11b1P50172 292 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 EnsaP60840 121 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Atf1P81269 269 aaKnown RBP18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 UqcrhP99028 89 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Pon3Q62087 354 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Inca1Q6PKN7 231 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1061Q7TR72 313 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 QpctlQ8BH73 383 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Zfp52Q8BJ45 724 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Cnot4Q8BT14 575 aaKnown RBP18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1504Q8VFQ4 315 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr678Q8VG26 313 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr980Q8VH08 310 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr974Q8VH09 310 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Clint1Q99KN9 631 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Exosc8Q9D753 276 aaKnown RBP18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Il21Q9ES17 146 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Asah1Q9WV54 394 aa18.41■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr721-ps1A0A140T8T9 324 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm13769A2ATW2 309 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr550E9Q544 316 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Vmn2r124K7N789 855 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 P04945 108 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Id1P20067 168 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1442Q0VEV7 312 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Crtc2Q3U182 692 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rasl10bQ5SSG5 203 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Dact2Q7TN08 757 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Adam30Q811Q3 732 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Nob1Q8BW10 403 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 CdiptQ8VDP6 213 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Arfgap3Q9D8S3 523 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Rbm24D3Z4I3 236 aaKnown RBP18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm8225D3Z536 292 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 4931429L15RikE9PVU2 379 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Nr1h5E9Q5A6 505 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm3033M0QWI0 180 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 HhexP43120 271 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Npbwr1P49681 329 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr142Q60881 305 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Bpnt1Q9Z0S1 308 aa18.4■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Enpp7D3Z6V6 446 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm5796E9Q7M8 205 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 9130019O22RikG3X941 543 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm3629K7N6Y2 205 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm3696K7N751 203 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm8281L7N235 204 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 P18532 116 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pou2f1P25425 770 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Parp16Q7TMM8 322 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 SynprQ8BGN8 265 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr450Q8VF81 310 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1260Q8VGN9 310 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Mrgpra4Q91WW2 313 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Plxdc1Q91ZV7 500 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Adam28Q9JLN6 793 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms