RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Oprm1P42866 398 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Plpp1Q61469 283 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 CebpeQ6PZD9 281 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lrp10Q7TQH7 713 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mmp28Q8CGV8 520 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Spns1Q8R0G7 528 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1393Q8VFA7 311 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Abhd17aQ99JW1 310 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tnfrsf12aQ9CR75 129 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Kcnip3Q9QXT8 256 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Minpp1Q9Z2L6 481 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm10112D3YWP5 117 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Prr23a2D3YWX5 253 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nanos2P60322 136 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Barhl1P63157 327 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ctf2P83714 204 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Smim4Q8C1Q6 80 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r225Q8R2A5 298 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 BlvrbQ923D2 206 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mrm2Q9CPY0 246 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Golt1aQ9DCQ3 133 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Klf5Q9Z0Z7 446 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr750E9Q0Z1 331 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1507Q0VEP0 313 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp872Q3UVL3 465 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tex261Q62302 196 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mogat2Q80W94 334 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lrtm2Q8BGX3 370 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mmp21Q8K3F2 568 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 CmblQ8R1G2 245 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Uqcr10Q8R1I1 64 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1384Q8VFA8 318 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dnttip1Q99LB0 328 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nudcd2Q9CQ48 157 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 NubplQ9CWD8 319 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Spsb1Q9D5L7 273 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q9D9C7 252 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tmem38bQ9DAV9 292 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 DhdhQ9DBB8 333 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Kcnip2Q9JJ69 270 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr573-ps1A0A1B0GRU2 297 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm4177D3YTX5 305 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Smim18J3QNP2 93 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r127K7N6J5 305 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r142K7N6U0 305 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r115K7N6Y3 295 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tbx15O70306 602 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Prss38Q3UKY7 322 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Selenbp2Q63836 472 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1216Q7TR05 311 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 SetmarQ80UJ9 309 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Flrt3Q8BGT1 649 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Sdhaf4Q8BTE0 104 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr862Q8VFJ1 306 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 AldobQ91Y97 364 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dtd1Q9DD18 209 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Smco4Q9JIS3 59 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Abhd16aQ9Z1Q2 558 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mrgpra9A0A140T8U8 332 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm572B1ARY8 399 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tmem182B2RVY9 229 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r120K7N6J6 305 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 RrhO35214 337 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01635 115 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 RbpjP31266 526 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Guca2aP33680 116 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lefty1Q64280 368 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cdhr3Q8BL00 831 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Seh1lQ8R2U0 360 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 CytipQ91VY6 359 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Abhd3Q91ZH7 411 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Jag2Q9QYE5 1247 aa9.26□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cdc34bA0A140T8I4 237 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm20489A2AGH5 449 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r91E9PZR7 307 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm21721J3QMK7 227 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 SncaO55042 140 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rab5cP35278 216 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Srp9P49962 86 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nkx2-1P50220 372 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ube2kP61087 200 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rpl35Q6ZWV7 123 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lrrc75aQ7TSF4 339 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1475Q8VEV6 314 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1301Q8VGE7 312 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cacng5Q8VHW4 275 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Sytl3Q99N48 607 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q9D4G1 230 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Hacd1Q9QY80 281 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TriobpQ99KW3 2014 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ssc4dA1L0T3 586 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Scml2B1AVB3 969 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr64F8VPZ8 307 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Prr23a1G3UW32 258 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r27K7N688 303 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mtco2P00405 227 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 HbzP06467 142 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cox5aP12787 146 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cks2P56390 79 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q3UUX7 111 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms