RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 HbegfQ06186 208 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam187bQ0VAY3 358 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp7Q3TFZ4 685 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mbd3l2Q3UXB0 228 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Prss53Q571E5 552 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Trp53rkaQ5U452 244 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cfhr1Q61406 343 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fbxl14Q8BID8 400 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r230Q8R2A2 316 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r36Q8R2E3 305 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Glb1lQ8VC60 646 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr97Q8VFE1 310 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 NpntQ91V88 561 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tp53rkQ99PW4 244 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Arl13aQ9D416 372 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 MeiobQ9D513 470 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tex43Q9D9I1 141 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Isg20Q9JL16 300 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Phf1Q9Z1B8 559 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Trav1A0A075B5Z4 110 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ighv1-24A0A0A6YY24 117 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm35060A0A140LIV7 231 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp930A0A1D5RM15 441 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1245A0A1L1SQJ6 307 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 AI182371A2AS37 356 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1055A2AVX9 346 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp944E9PUS4 492 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Esp3J3QN49 87 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tbx15O70306 602 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 P01798 113 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Hes1P35428 282 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PjvkQ0ZLH2 352 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Defb43Q30KM9 69 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Acsf3Q3URE1 583 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Itgb2lQ3UV74 738 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam189a2Q4FZH1 290 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr324Q5NCC7 333 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr142Q60881 305 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1509Q7TQQ0 308 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nanos1Q80WY3 267 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1294Q8VGE5 312 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mus81Q91ZJ0 551 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rnf2Q9CQJ4 336 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pga5Q9D106 387 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tctex1d1Q9D5I4 173 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Wdr5bQ9D7H2 328 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam210bQ9D8B6 190 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Six6Q9QZ28 246 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rhox7bA6PW38 321 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm8882E9Q7E4 283 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mtatp6P00848 226 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ifna6P07350 189 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ier3P46694 153 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fabp7P51880 132 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r15Q14C10 299 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rhox4gQ2MDF7 205 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Defb25Q30KN8 71 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Smim6Q3U0I6 56 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam196aQ3USH1 422 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 HrasQ61411 189 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ManealQ6P1J0 452 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Clec7aQ6QLQ4 244 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp729bQ80VN4 1045 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Metap1Q8BP48 386 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam221aQ8C790 301 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pars2Q8CFI5 475 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ApehQ8R146 732 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r211Q8R266 298 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Acer1Q8R4X1 273 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Clec2fQ8VI21 196 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pofut1Q91ZW2 393 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tmem27Q9ESG4 222 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ccr9Q9WUT7 369 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sned1Q70E20 1403 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tiam2Q6ZPF3 1715 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Trbv21A0A0A6YX06 97 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 AU041133A0A0J9YVH3 498 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rpl7a-ps5A0A140T8L3 268 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Igkv7-33P01632 114 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fpr1P33766 364 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Stfa1P35175 97 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q0VG62 139 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Thsd4Q3UTY6 1018 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ube2fbQ3UWQ3 185 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 MENTQ569E4 350 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Klf3Q60980 344 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gp49aQ61450 303 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gpr173Q6PI62 373 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sys1Q78S06 156 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q8C4X7 151 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr229Q8VFN5 307 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Asb9Q91ZT8 290 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PbkQ9JJ78 330 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Lgals8Q9JL15 316 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mnx1Q9QZW9 404 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Lrp6O88572 1613 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Btbd8D3YUB6 377 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rnf148G3X9R7 316 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fut1O09160 376 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sh2d1bO35324 132 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms