RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF20P17024 532 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 PRTN3P24158 256 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 MRPL28Q13084 256 aaKnown RBP12.39□□□□□ -0.43
PHGDH-231ENST00000641939 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 ZNF676Q8N7Q3 588 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 TMEM185AQ8NFB2 350 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 OR10AC1Q8NH08 325 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 FGGYQ96C11 551 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
PHGDH-231ENST00000641939 HES4Q9HCC6 221 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 FGF20Q9NP95 211 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-231ENST00000641939 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
PHGDH-231ENST00000641939 PRDX2P32119 198 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 RBP2P50120 134 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 CAPZA1P52907 286 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-231ENST00000641939 ERVK11-1P61568 191 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 ADARB1P78563 741 aaKnown RBP12.38□□□□□ -0.43
PHGDH-231ENST00000641939 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 ZNF561Q8N587 486 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 CD177Q8N6Q3 437 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 SETD9Q8NE22 299 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 DNAAF1Q8NEP3 725 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 OR51A4Q8NGJ6 313 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 OR13C3Q8NGS6 347 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 CNIH3Q8TBE1 160 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 LHX4Q969G2 390 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 C1orf147Q96MC9 270 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-231ENST00000641939 DUX5Q96PT3 197 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 JAM3Q9BX67 310 aa12.38□□□□□ -0.43
PHGDH-231ENST00000641939 TRBV23-1A0A0A0MS06 115 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 TMEM212A6NML5 194 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 E9PI62 339 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 CLDN34H7C241 214 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 SLC1A7O00341 560 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-231ENST00000641939 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 ATF1P18846 271 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 PRKACBP22694 351 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 DCKP27707 260 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 ATP1B3P54709 279 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 OGFRL1Q5TC84 451 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-231ENST00000641939 C1orf122Q6ZSJ8 110 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 GCDHQ92947 438 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-231ENST00000641939 SLC25A28Q96A46 364 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 PRDM13Q9H4Q3 707 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 ELL3Q9HB65 397 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-231ENST00000641939 MTCH1Q9NZJ7 389 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 OR14J1Q9UGF5 321 aa12.37□□□□□ -0.43
PHGDH-231ENST00000641939 MDFIC2A0A1B0GVS7 189 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 M0R1W7 72 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 ZFPL1O95159 310 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 KNG1P01042 644 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 CCDC159P0C7I6 412 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 OCM2P0CE71 109 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 OCMP0CE72 109 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-231ENST00000641939 AZGP1P25311 298 aaKnown RBP12.36□□□□□ -0.43
PHGDH-231ENST00000641939 CEBPDP49716 269 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-231ENST00000641939 MTCP1P56278 107 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 IL18R1Q13478 541 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 METAP1DQ6UB28 335 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-231ENST00000641939 C12orf54Q6X4T0 127 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 LHFPL2Q6ZUX7 228 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 Q8N7P7 452 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 OR5AK2Q8NH90 309 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 SLAMF9Q96A28 289 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 SPSB1Q96BD6 273 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 DCLRE1BQ9H816 532 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 NOX4Q9NPH5 578 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 SIRT7Q9NRC8 400 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 HSPE1-MOB4S4R3N1 261 aa12.36□□□□□ -0.43
PHGDH-231ENST00000641939 TRBV2A0A0J9YWF9 115 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 F8VVB4 439 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 F8VWA3 439 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 INMTO95050 263 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 CYB5AP00167 134 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
PHGDH-231ENST00000641939 CAPGP40121 348 aa12.35□□□□□ -0.43
PHGDH-231ENST00000641939 COMPP49747 757 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-231ENST00000641939 ETV1P50549 477 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms