RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ACTBP60709 375 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 ACTG1P63261 375 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 TSC22D1Q15714 1073 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 PAN3Q58A45 887 aaKnown RBP16.27■□□□□ 0.2
CLN5-219ENST00000637537 TMEM178AQ8NBL3 297 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 CMSS1Q9BQ75 279 aaKnown RBP16.27■□□□□ 0.2
CLN5-219ENST00000637537 PARPBPQ9NWS1 579 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 PCDHB10Q9UN67 800 aa16.27■□□□□ 0.2
CLN5-219ENST00000637537 KANTRA0A1W2PQU2 76 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 SNAPINO95295 136 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 CCNOP22674 350 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 THBS4P35443 961 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 SWI5Q1ZZU3 235 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 OR52W1Q6IF63 320 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 OR1S2Q8NGQ3 325 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 ZNF75AQ96N20 296 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 ADAT1Q9BUB4 502 aaKnown RBP16.26■□□□□ 0.19
CLN5-219ENST00000637537 CHST6Q9GZX3 395 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 BCO1Q9HAY6 547 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 CARHSP1Q9Y2V2 147 aaKnown RBP16.26■□□□□ 0.19
CLN5-219ENST00000637537 MED12LQ86YW9 2145 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 TNRC6AQ8NDV7 1962 aaKnown RBP16.26■□□□□ 0.19
CLN5-219ENST00000637537 A0A0A6YYH2 397 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 A6NJ64 397 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 OR2F2O95006 317 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 CAPZA1P52907 286 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 OR2F1Q13607 317 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 RAB12Q6IQ22 244 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 TRAPPC6BQ86SZ2 158 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 MCEMP1Q8IX19 187 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 SPAG16Q8N0X2 631 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 SEMA6DQ8NFY4 1073 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 OR10R2Q8NGX6 335 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 WDYHV1Q96HA8 205 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 UPB1Q9UBR1 384 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 TNFSF18Q9UNG2 199 aa16.26■□□□□ 0.19
CLN5-219ENST00000637537 ZNF587BE7ETH6 402 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 CYB5AP00167 134 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 PTGFRP43088 359 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 PCBD1P61457 104 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 SNTB1Q13884 538 aaKnown RBP16.25■□□□□ 0.19
CLN5-219ENST00000637537 DEFB109BQ30KR1 87 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 PLAC9Q5JTB6 97 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 TMEM59Q9BXS4 323 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 EDARQ9UNE0 448 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 ATMQ13315 3056 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 RAB3DO95716 219 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 ACTL6AO96019 429 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 CRYBA1P05813 215 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 PRF1P14222 555 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 TAS2R19P59542 299 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 ZNF92Q03936 586 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 NKPD1Q17RQ9 610 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 AVPI1Q5T686 147 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 NAXEQ8NCW5 288 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 PP6455Q8WZ26 134 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 ELL3Q9HB65 397 aaPredicted RBP16.25■□□□□ 0.19
CLN5-219ENST00000637537 PRSS50Q9UI38 385 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 ARHGAP21Q5T5U3 1957 aa16.25■□□□□ 0.19
CLN5-219ENST00000637537 SULT1C2O00338 296 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 FABP1P07148 127 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 SLC25A4P12235 298 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 SERPINA2P20848 420 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 SRSF4Q08170 494 aaKnown RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 C4orf46Q504U0 113 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF600Q6ZNG1 722 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 CD163Q86VB7 1156 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF100Q8IYN0 542 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 BOLLQ8N9W6 283 aaKnown RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 KCNG3Q8TAE7 436 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 NANPQ8TBE9 248 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 LINC00470Q9BZP3 86 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZDHHC11Q9H8X9 412 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF230Q9UIE0 474 aaPredicted RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 MEX3AA1L020 520 aaKnown RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF736B4DX44 427 aaPredicted RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 AMY2AP04746 511 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 MELTFP08582 738 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 KRTAP27-1Q3LI81 207 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF584Q8IVC4 421 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 PNLDC1Q8NA58 520 aaKnown RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZFP57Q9NU63 452 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 DLL3Q9NYJ7 618 aa16.24■□□□□ 0.19
CLN5-219ENST00000637537 ZNF629Q9UEG4 869 aaPredicted RBP16.24■□□□□ 0.19
CLN5-219ENST00000637537 LOC100509620A0A075B734 347 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 FAM230AA0A1W2PPH8 454 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 OR5H14A6NHG9 310 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 HEXAP06865 529 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 SMIM6P0DI80 62 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 EDN3P14138 238 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 TMEM50BP56557 158 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 THAP6Q8TBB0 222 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 PDCD10Q9BUL8 212 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 GSN-AS1Q9NRJ2 163 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 TINAGQ9UJW2 476 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 ZNF724A8MTY0 619 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 CD79AP11912 226 aa16.23■□□□□ 0.19
CLN5-219ENST00000637537 RNPS1Q15287 305 aaKnown RBP16.23■□□□□ 0.19
CLN5-219ENST00000637537 SCGB2B2Q4G0G5 96 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms