RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 OR8U1Q8NH10 309 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 NTNG2Q96CW9 530 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
CLN6-215ENST00000636674 METTL9Q9H1A3 318 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 IFT22Q9H7X7 185 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
CLN6-215ENST00000636674 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 CRYGSP22914 178 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 MEOX2P50222 304 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 STARD6P59095 220 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 RNF212Q495C1 297 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 ZNF385AQ96PM9 386 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 GINS3Q9BRX5 216 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 HDHD3Q9BSH5 251 aaPredicted RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 SCRT1Q9BWW7 348 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 SUCNR1Q9BXA5 334 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 LIME1Q9H400 295 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 KCNIP3Q9Y2W7 256 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 EML6Q6ZMW3 1958 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 ASCC3Q8N3C0 2202 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 H7C1Q1 480 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 TERTO14746 1132 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 DANCRP0C864 163 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 TMEM225BP0DP42 221 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 LMO1P25800 156 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 CHATP28329 748 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 KCNJ3P48549 501 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 PIGPP57054 158 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 RAB5BP61020 215 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 MRPS34P82930 218 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 HGFACQ04756 655 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 GPR157Q5UAW9 335 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 FAM27BQ5VT28 67 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 MRPL14Q6P1L8 145 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 ERGIC1Q969X5 290 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 SGK3Q96BR1 496 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 TUBA4BQ9H853 241 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 AK3Q9UIJ7 227 aa12.67□□□□□ -0.38
CLN6-215ENST00000636674 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
CLN6-215ENST00000636674 LOC102723996A0A087X1L8 192 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 NPIPA2E9PIF3 369 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 NPIPA3F8WFD2 350 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 GPR137BO60478 399 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 MBPP02686 304 aaPredicted RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 SNCAP37840 140 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 P2RY1P47900 373 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 MTCP1P56278 107 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 HABP2Q14520 560 aaPredicted RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 RAB35Q15286 201 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 CNN3Q15417 329 aaKnown RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 MAML2Q8IZL2 1156 aaPredicted RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 PLEK2Q9NYT0 353 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 MRPS17Q9Y2R5 130 aaKnown RBP12.66□□□□□ -0.38
CLN6-215ENST00000636674 MUC6Q6W4X9 2439 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 BORCS7-ASMTA0A0B4J1R7 106 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 AGPAT2O15120 278 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 DBHP09172 617 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 ZNF728P0DKX0 622 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 PTAFRP25105 342 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 ACKR3P25106 362 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 PMELP40967 661 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 ID4P47928 161 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 RAB5CP51148 216 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 IL13RA2Q14627 380 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 PCOLCEQ15113 449 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 LCN10Q6JVE6 187 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 C18orf12Q96KH6 178 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 GPR173Q9NS66 373 aa12.66□□□□□ -0.38
CLN6-215ENST00000636674 IGHV5-10-1A0A0J9YXX1 117 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 A0A1W2PQM1 296 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 TSPAN15O95858 294 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 UCP3P55916 312 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 DSCR4P56555 118 aaPredicted RBP12.65□□□□□ -0.38
CLN6-215ENST00000636674 TMEM42Q69YG0 159 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 TMEM105Q8N8V8 129 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 C2CD4CQ8TF44 421 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 RTN4IP1Q8WWV3 396 aaPredicted RBP12.65□□□□□ -0.38
CLN6-215ENST00000636674 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 FBXO17Q96EF6 278 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 SMIM3Q9BZL3 60 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 ULBP2Q9BZM5 246 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 WDR54Q9H977 334 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 IL36GQ9NZH8 169 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.38
CLN6-215ENST00000636674 STRAPQ9Y3F4 350 aaKnown RBP12.65□□□□□ -0.38
CLN6-215ENST00000636674 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.39
CLN6-215ENST00000636674 DNPH1O43598 174 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms