RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 OR5AC2Q9NZP5 309 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PTGDR2Q9Y5Y4 395 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 C3P01024 1663 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PRKNO60260 465 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ATP1B1P05026 303 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 HMGN2P05204 90 aaKnown RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 VDAC1P21796 283 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 HOXD9P28356 352 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 STARD6P59095 220 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SNRPD3P62318 126 aaKnown RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TSPAN31Q12999 210 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ERV3-1Q14264 604 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SHBQ15464 509 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PNLIPRP3Q17RR3 467 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 DEFB109BQ30KR1 87 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PTCRAQ6ISU1 281 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 FBXO46Q6PJ61 603 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF66Q6ZN08 573 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 FAM219AQ8IW50 185 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 APCDD1Q8J025 514 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 DEFB108BQ8NET1 73 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SLC35B2Q8TB61 432 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ARRDC2Q8TBH0 407 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ST8SIA1Q92185 356 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CDX2Q99626 313 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PRSS16Q9NQE7 514 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IGKV3D-11A0A0A0MRZ8 115 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IGKV3-11P04433 115 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PGA4P0DJD7 388 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PGA5P0DJD9 388 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ALOX5APP20292 161 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 FCGR2CP31995 323 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 KLF3P57682 345 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PLK5Q496M5 336 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 OR52E1Q8NGJ3 308 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 OR2K2Q8NGT1 345 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CLEC4CQ8WTT0 213 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 BADQ92934 168 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 DTD2Q96FN9 168 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 C1QTNF6Q9BXI9 259 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 MS4A7Q9GZW8 240 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CXXC4Q9H2H0 198 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CDC42EP3Q9UKI2 254 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CSPG4Q6UVK1 2322 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TRAV17A0A0B4J275 112 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 DUXBA0A1W2PPF3 345 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF840PA6NDX5 716 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CAMPP49913 170 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 MOGAT3Q86VF5 341 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 RPS4Y2Q8TD47 263 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SRD5A3Q9H8P0 318 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ADGRL4Q9HBW9 690 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 UQCC1Q9NVA1 299 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PIPOXQ9P0Z9 390 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SPATA31D1Q6ZQQ2 1576 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SOCS7O14512 581 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ADAP1O75689 374 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PAPLNO95428 1278 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 INHBBP09529 407 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 GABRB3P28472 473 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 EMX1Q04741 257 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF789Q5FWF6 425 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TAS1R1Q7RTX1 841 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ROBO4Q8WZ75 1007 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 HINT3Q9NQE9 182 aaKnown RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 BEX4Q9NWD9 120 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 LHX3Q9UBR4 397 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 COL14A1Q05707 1796 aaKnown RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 RGPD5Q99666 1765 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TRAV8-7A0A075B6U6 113 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IGHV3OR16-12A0A075B7B8 117 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TRBV7-9A0A0J9YWB2 115 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 P2RY10O00398 339 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 RAB29O14966 203 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 SOD1P00441 154 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IQCF3P0C7M6 154 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 BMP2P12643 396 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 CCR2P41597 374 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 FAM74A3Q4VXF1 159 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 FCRL6Q6DN72 434 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 ASCL4Q6XD76 172 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IRF2BP1Q8IU81 584 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 UMODL1-AS1Q8N2C9 162 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TOX2Q96NM4 488 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 IL17FQ96PD4 163 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 KIR2DL4Q99706 377 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM204Q9BSN7 226 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 PARP12Q9H0J9 701 aaKnown RBP5.43□□□□□ -1.54
SCN1A-212ENST00000636194 MIOXQ9UGB7 285 aa5.43□□□□□ -1.54
SCN1A-212ENST00000636194 DEPDC5O75140 1603 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 TRBV23-1A0A0A0MS06 115 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 TCRBV5S4A2TA0A5A2 114 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 H0YGG7 62 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 NKX2-8O15522 239 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 FAM157BP0CG42 384 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 NAT2P11245 290 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 MMP11P24347 488 aa5.42□□□□□ -1.54
SCN1A-212ENST00000636194 MAS1LP35410 378 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms