RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ATF1P18846 271 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 PRKACBP22694 351 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 FPR2P25090 351 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 RBP2P50120 134 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 ATP1B3P54709 279 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 IL13RA1P78552 427 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 IKZF1Q13422 519 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 CCDC58Q4VC31 144 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 OR2G6Q5TZ20 316 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 RPL22L1Q6P5R6 122 aaKnown RBP12.88□□□□□ -0.35
LINC00339-209ENST00000635450 BRD3OSQ6XYD6 125 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 ACP7Q6ZNF0 438 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 UTS2BQ765I0 119 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 BTN2A1Q7KYR7 527 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 BPIFB6Q8NFQ5 453 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 ANGPTL6Q8NI99 470 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 PDCD1LG2Q9BQ51 273 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 DHDHQ9UQ10 334 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 A0A1B0GW55 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 E9PI62 339 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 NOS1APO75052 506 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-209ENST00000635450 CYB5AP00167 134 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 PLATP00750 562 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 PSG2P11465 335 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 MPZP25189 248 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
LINC00339-209ENST00000635450 GTF2A1P52655 376 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-209ENST00000635450 IL24Q13007 206 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-209ENST00000635450 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 LHFPL2Q6ZUX7 228 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 AHSA2Q719I0 299 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 ANGPTL5Q86XS5 388 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 CALHM1Q8IU99 346 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 FBLIM1Q8WUP2 373 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 SPSB1Q96BD6 273 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
LINC00339-209ENST00000635450 MYL12BO14950 172 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 SFTPBP07988 381 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 ACAA1P09110 424 aaPredicted RBP12.86□□□□□ -0.35
LINC00339-209ENST00000635450 PRTN3P24158 256 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 MTCP1P56278 107 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 FGF12P61328 243 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 SERPINA12Q8IW75 414 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 MKXQ8IYA7 352 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 OR5D14Q8NGL3 314 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 GATAD2BQ8WXI9 593 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 H1FXQ92522 213 aaKnown RBP12.86□□□□□ -0.35
LINC00339-209ENST00000635450 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 GAFA1Q96PS6 74 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
LINC00339-209ENST00000635450 CLEC2DQ9UHP7 191 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
LINC00339-209ENST00000635450 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
LINC00339-209ENST00000635450 IGKV1D-17A0A075B6S4 117 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 IGKV1-27A0A075B6S5 117 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 RFPL4AA6NLU0 287 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 RFPL4AL1F8VTS6 287 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 INMTO95050 263 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 CD2P06729 351 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 HKR1P10072 659 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 NDUFB7P17568 137 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 AMY2BP19961 511 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 HSPA13P48723 471 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 CAPZA1P52907 286 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 BAMBIQ13145 260 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 SLC9A3R2Q15599 337 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 METTL11BQ5VVY1 283 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 SLC25A26Q70HW3 274 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 TMEM185AQ8NFB2 350 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 GPR148Q8TDV2 347 aa12.85□□□□□ -0.35
LINC00339-209ENST00000635450 CEP19Q96LK0 163 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms