RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RDH10Q8IZV5 341 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 GPD1LQ8N335 351 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 OR1L8Q8NGR8 309 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 OR52N5Q8NH56 324 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 GNPDA2Q8TDQ7 276 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ASB13Q8WXK3 278 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 MYLIPQ8WY64 445 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 SARAFQ96BY9 339 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ZMYND19Q96E35 227 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 C4orf45Q96LM5 186 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ZNF382Q96SR6 550 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 MACROD1Q9BQ69 325 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 FAM173AQ9BQD7 235 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 URM1Q9BTM9 101 aaKnown RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 TRAF4Q9BUZ4 470 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 HES7Q9BYE0 225 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 TBL1XR1Q9BZK7 514 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ELL3Q9HB65 397 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 SH2D2AQ9NP31 389 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 IDI2-AS1Q9NZ38 188 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 WRAP73Q9P2S5 460 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 CARHSP1Q9Y2V2 147 aaKnown RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ASTN1O14525 1302 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 CFAP54Q96N23 3096 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 A0A1W2PRE2 83 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 DAPL1A0PJW8 107 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR4C46A6NHA9 309 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 TRIM49D1C9J1S8 452 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 M0R1B8 84 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RHODO00212 210 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 NME4O00746 187 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 EI24O14681 340 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 TP53I11O14683 189 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 TIMM23O14925 209 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 STK16O75716 305 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 SUPT7LO94864 414 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 IGHV2-5P01817 119 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR13C7P0DN81 318 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FGF3P11487 239 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PVRP15151 417 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 MYOD1P15172 320 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FMO3P31513 532 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RPA3P35244 121 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RPL3P39023 403 aaKnown RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 GALR1P47211 349 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 GZMMP51124 257 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 LAMB2P55268 1798 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 DLX1P56177 255 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CACNA1BQ00975 2339 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FOXF2Q12947 444 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RAB35Q15286 201 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ELAVL1Q15717 326 aaKnown RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ZNF284Q2VY69 593 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FAM120AOSQ5T036 256 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OTPQ5XKR4 325 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PAMR1Q6UXH9 720 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 TOMM20LQ6UXN7 152 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ZNF730Q6ZMV8 503 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 C10orf107Q8IVU9 208 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR4N5Q8IXE1 308 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CLIP4Q8N3C7 705 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 GVQW1Q8N7I0 195 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR8U1Q8NH10 309 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR13C6PQ8NH95 151 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PHLDA1Q8WV24 401 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PPCDCQ96CD2 204 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 TM4SF18Q96CE8 201 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 SPATA25Q9BR10 227 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ALOXE3Q9BYJ1 711 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RBKSQ9H477 322 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 REEP1Q9H902 201 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 MSL2Q9HCI7 577 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 GNPTGQ9UJJ9 305 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ASF1AQ9Y294 204 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR51B2Q9Y5P1 312 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RAI2Q9Y5P3 530 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CHD8Q9HCK8 2581 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PCM1Q15154 2024 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 MYH3P11055 1940 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 PTPRJQ12913 1337 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FAM166BA8MTA8 275 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 DIRC3C9JPN6 131 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 SMIM22K7EJ46 135 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 FAM107AO95990 144 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CT45A7P0DMV0 189 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OR1D4P47884 311 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 RORCP51449 518 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 POU3F1Q03052 451 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 ARL16Q0P5N6 197 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 HNRNPA0Q13151 305 aaKnown RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 SNRNP35Q16560 246 aaKnown RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 IZUMO4Q1ZYL8 232 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 CT45A1Q5HYN5 189 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 C8orf82Q6P1X6 216 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-213ENST00000630925 XKRXQ6PP77 449 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 OPN5Q6U736 354 aa4.07□□□□□ -1.76
SDCBP-213ENST00000630925 C12orf54Q6X4T0 127 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms