RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ELF5Q9UKW6 265 aaPredicted RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 TP53TG5Q9Y2B4 290 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 PTPRQQ9UMZ3 2332 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ASPMQ8IZT6 3477 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 G3V3Y1 287 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 M0QYG6 137 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 SLC22A5O76082 557 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 TXNDC12O95881 172 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 FAUP35544 74 aaKnown RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 MNDAP41218 407 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 PTGDSP41222 190 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 DBPQ10586 325 aaPredicted RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 IKZF1Q13422 519 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 CD226Q15762 336 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF74Q16587 644 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 TMEM69Q5SWH9 247 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF684Q5T5D7 378 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 OR52W1Q6IF63 320 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF417Q8TAU3 575 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF436Q9C0F3 470 aaPredicted RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1B0GV90 55 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1W2PNV4 684 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 SMCO3A2RU48 225 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 LINC00862A6NCI5 91 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 K7EM74 188 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF593O00488 134 aaPredicted RBP10.12□□□□□ -0.79
LINC00538-201ENST00000626109 PIN1P1O15428 100 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 GHRHP01286 108 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 CDKN2AP42771 156 aaKnown RBP10.12□□□□□ -0.79
LINC00538-201ENST00000626109 SLC6A8P48029 635 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 DNASE1L1P49184 302 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 LINC01590Q5TEZ4 76 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 FNDC7Q5VTL7 733 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 ATG4DQ86TL0 474 aaPredicted RBP10.12□□□□□ -0.79
LINC00538-201ENST00000626109 C11orf44Q8N8P7 122 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 SYNPRQ8TBG9 265 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 ABHD5Q8WTS1 349 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 PIGCQ92535 297 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 MARVELD3Q96A59 401 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 Q96M85 177 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF385AQ96PM9 386 aaKnown RBP10.12□□□□□ -0.79
LINC00538-201ENST00000626109 FAM173AQ9BQD7 235 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 HES7Q9BYE0 225 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 DLL4Q9NR61 685 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
LINC00538-201ENST00000626109 CSAG2Q9Y5P2 127 aa10.12□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1W2PPQ1 181 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 AQP7P3A6NL99 342 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 TMEM212A6NML5 194 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 RS1O15537 224 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 EIF4E2O60573 245 aaKnown RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 CXCL3P19876 107 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 HOXA1P49639 335 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 PJVKQ0ZLH3 352 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF169Q14929 603 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 TAF13Q15543 124 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 STAC2Q6ZMT1 411 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 Q6ZS92 163 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 HDDC2Q7Z4H3 204 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 IZUMO1Q8IYV9 350 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ADPRHL1Q8NDY3 354 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OR2M7Q8NG81 312 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OR52I2Q8NH67 350 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF563Q8TA94 476 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ZNRF4Q8WWF5 429 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 SORCS2Q96PQ0 1159 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 PROK2Q9HC23 129 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 BOKQ9UMX3 212 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 FKBP7Q9Y680 259 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 A0A0G2JMM0 328 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1W2PPB8 328 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1W2PRS3 328 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ANKRD20A5PA0PJZ0 165 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 KIR3DP1A8MWS1 328 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ADAM10O14672 748 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 RAD51DO75771 328 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 SERPINA5P05154 406 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 CRHP06850 196 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 MELTFP08582 738 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 CPN1P15169 458 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF117Q03924 483 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OLFML2AQ68BL7 652 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 SFRP4Q6FHJ7 346 aaPredicted RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OR2A2Q6IF42 318 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 CDC20BQ86Y33 519 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 GLB1L2Q8IW92 636 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 SPICQ8N5J4 248 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 RBMXL3Q8N7X1 1067 aaKnown RBP10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
LINC00538-201ENST00000626109 OR4K17Q8NGC6 315 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms