RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CD37P11049 281 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
PNKP-217ENST00000625216 RAB3AP20336 220 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 CPT2P23786 658 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 CFPP27918 469 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 BDKRB2P30411 391 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 BMXP51813 675 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 CLDN12P56749 244 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 RIPPLY1Q0D2K3 151 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 DMRTC1Q5HYR2 192 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 DDI2Q5TDH0 399 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 OR2T2Q6IF00 324 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 FAHD2BQ6P2I3 314 aaPredicted RBP10.63□□□□□ -0.71
PNKP-217ENST00000625216 PGAP1Q75T13 922 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 LAX1Q8IWV1 398 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 NKAIN3Q8N8D7 197 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 OR52N4Q8NGI2 321 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 OR5D14Q8NGL3 314 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 PP6455Q8WZ26 134 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 AP3S1Q92572 193 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 FAHD2AQ96GK7 314 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 TMEM138Q9NPI0 162 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 PPP1R3CQ9UQK1 317 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 PPIAL4EA0A075B759 164 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 A0A0A6YYJ9 748 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 PPIAL4CA0A0B4J2A2 164 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 A0A0G2JMP0 313 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 A0A0X1KG70 313 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 ZNF816-ZNF321PA0A0X1KG74 233 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 ISPDA4D126 451 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 GGT3PA6NGU5 568 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 CD300LBA8K4G0 201 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 PPIAL4DF5H284 164 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 SLC17A2O00624 439 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 TCF21O43680 179 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 PPIAL4FP0DN26 164 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 AZGP1P25311 298 aaKnown RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 TMEM155Q4W5P6 130 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 CLVS2Q5SYC1 327 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 ZBTB37Q5TC79 503 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 CRIP3Q6Q6R5 217 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 LRRC28Q86X40 367 aaPredicted RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 OR4M2Q8NGB6 313 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 OR5H6Q8NGV6 325 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 TRMT10AQ8TBZ6 339 aaKnown RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 ITLN1Q8WWA0 313 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 SPACA5Q96QH8 159 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 FGF23Q9GZV9 251 aaPredicted RBP10.62□□□□□ -0.71
PNKP-217ENST00000625216 KCNK15Q9H427 330 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 AKIP1Q9NQ31 210 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 TMEM100Q9NV29 134 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 COMMD3Q9UBI1 195 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 PEX16Q9Y5Y5 336 aa10.62□□□□□ -0.71
PNKP-217ENST00000625216 A0A1B0GWJ7 208 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 GMDSO60547 372 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 HPGDSO60760 199 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 FOXH1O75593 365 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 IGHV2-70P01814 119 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 DYNC1I2Q13409 638 aaKnown RBP10.61□□□□□ -0.71
PNKP-217ENST00000625216 P2RY14Q15391 338 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 C1orf100Q5SVJ3 147 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 GLT8D1Q68CQ7 371 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 LINC00299Q6ZSB3 139 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 KRT74Q7RTS7 529 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 JAGN1Q8N5M9 183 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 ACOT12Q8WYK0 555 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 PIGCQ92535 297 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 DVL3Q92997 716 aaPredicted RBP10.61□□□□□ -0.71
PNKP-217ENST00000625216 SLC25A28Q96A46 364 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 WDFY2Q96P53 400 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 SLC22A4Q9H015 551 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 METTL17Q9H7H0 456 aaPredicted RBP10.61□□□□□ -0.71
PNKP-217ENST00000625216 PLGRKTQ9HBL7 147 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 ABCB9Q9NP78 766 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 ABRACLQ9P1F3 81 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
PNKP-217ENST00000625216 NOP16Q9Y3C1 178 aaKnown RBP10.61□□□□□ -0.71
PNKP-217ENST00000625216 ZNF850A8MQ14 1090 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 RGS5O15539 181 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 ALX3O95076 343 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 FSTL3O95633 263 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 CST4P01036 141 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 NRASP01111 189 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 ALDOBP05062 364 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 HCKP08631 526 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms