RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 DOK3Q7L591 496 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 WDFY1Q8IWB7 410 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 FAM89BQ8N5H3 189 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 USB1Q9BQ65 265 aaKnown RBP15.39■□□□□ 0.05
PCF11-207ENST00000624931 TTTY12Q9BZ98 90 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 ZNF703Q9H7S9 590 aaPredicted RBP15.39■□□□□ 0.05
PCF11-207ENST00000624931 OSGIN2Q9Y236 505 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 MSRB2Q9Y3D2 182 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 CEP295Q9C0D2 2601 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 APC2O95996 2303 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 SPTBN4Q9H254 2564 aa15.39■□□□□ 0.05
PCF11-207ENST00000624931 ZFHX4Q86UP3 3567 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 MUC1P15941 1255 aaPredicted RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 ZNF17P17021 662 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 ALDH3B1P43353 468 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 NPY4RP50391 375 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 POU3F1Q03052 451 aaPredicted RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 SMCO1Q147U7 214 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 BTNL8Q6UX41 500 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 PNLDC1Q8NA58 520 aaKnown RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 CCDC54Q8NEL0 328 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 RXFP4Q8TDU9 374 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 SFT2D1Q8WV19 159 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 C5orf34Q96MH7 638 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 RTBDNQ9BSG5 229 aaPredicted RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 OR10A2Q9H208 303 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 ESRP2Q9H6T0 727 aaKnown RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 C1orf123Q9NWV4 160 aa15.38■□□□□ 0.05
PCF11-207ENST00000624931 C14orf166Q9Y224 244 aaKnown RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 TNRC6AQ8NDV7 1962 aaKnown RBP15.38■□□□□ 0.05
PCF11-207ENST00000624931 RAMP1O60894 148 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 MAGEA5P43359 124 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SRSF3P84103 164 aaKnown RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 FAM3AP98173 230 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 ARFRP1Q13795 201 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SLC9A3R2Q15599 337 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SWI5Q1ZZU3 235 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 ZNF766Q5HY98 468 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 PLAC9Q5JTB6 97 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 OR5AS1Q8N127 324 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SLC25A43Q8WUT9 341 aaPredicted RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 PIGQQ9BRB3 760 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 HRH4Q9H3N8 390 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 TUBA4BQ9H853 241 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 OR5AC2Q9NZP5 309 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 MEX3AA1L020 520 aaKnown RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 SERPINE3A8MV23 424 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 MED6O75586 246 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 FCGR3AP08637 254 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SPP1P10451 314 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 CD46P15529 392 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 SUPT4H1P63272 117 aaKnown RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 PMP22Q01453 160 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 PLGLB1Q02325 96 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 RAB32Q13637 225 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 KCNMB1Q16558 191 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 ANKRD55Q3KP44 614 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 TMEM251Q8N6I4 163 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 LYPD6BQ8NI32 183 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 HAS2Q92819 552 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 C1orf147Q96MC9 270 aaPredicted RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 TCEAL7Q9BRU2 100 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 NICN1Q9BSH3 213 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 MRPL13Q9BYD1 178 aaKnown RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 CNTNAP3Q9BZ76 1288 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 PLEKHA2Q9HB19 425 aa15.37■□□□□ 0.05
PCF11-207ENST00000624931 KLF13Q9Y2Y9 288 aaPredicted RBP15.37■□□□□ 0.05
PCF11-207ENST00000624931 A0A0A6YYD4 124 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 IGHV3-15A0A0B4J1V0 119 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 A0A0J9YW62 118 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 MSGN1A6NI15 193 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 COLCA2A8K830 154 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 C1orf196B1AJZ1 125 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 TNFSF11O14788 317 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 SOCS1O15524 211 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 SFTA3P0C7M3 94 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 SMIM6P0DI80 62 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 PRF1P14222 555 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 PMELP40967 661 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 EIF2S3P41091 472 aaKnown RBP15.36■□□□□ 0.05
PCF11-207ENST00000624931 TNFSF10P50591 281 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 ZNF84P51523 738 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 P2RY4P51582 365 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 GRB2P62993 217 aaKnown RBP15.36■□□□□ 0.05
PCF11-207ENST00000624931 SPACA3Q8IXA5 215 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 OR51E1Q8TCB6 317 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 SULT4A1Q9BR01 284 aa15.36■□□□□ 0.05
PCF11-207ENST00000624931 RRP8O43159 456 aaKnown RBP15.35■□□□□ 0.05
PCF11-207ENST00000624931 ADAP1O75689 374 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 CEACAM4O75871 244 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 IFNA2P01563 188 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 IFNA21P01568 189 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 IGHG1P01857 330 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 S100A9P06702 114 aaKnown RBP15.35■□□□□ 0.05
PCF11-207ENST00000624931 HCKP08631 526 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 HKR1P10072 659 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 PTAFRP25105 342 aa15.35■□□□□ 0.05
PCF11-207ENST00000624931 RBMXP38159 391 aaKnown RBP15.35■□□□□ 0.05
PCF11-207ENST00000624931 BIDP55957 195 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms