RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TEX30Q5JUR7 227 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 C1orf100Q5SVJ3 147 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ARRDC1-AS1Q9H2J1 176 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 G6PC2Q9NQR9 355 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ADAM10O14672 748 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 RAB1AP62820 205 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 RSPO4Q2I0M5 234 aaPredicted RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 OR2B11Q5JQS5 317 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ZFP62Q8NB50 900 aaPredicted RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 DYRK2Q92630 601 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 FER1L6-AS2Q96M78 137 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 TWSG1Q9GZX9 223 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 DUSP15Q9H1R2 295 aaPredicted RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 UFSP2Q9NUQ7 469 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 R4GN57 208 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 CCDC187A0A096LP49 1063 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 SIRPB1O00241 398 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 HPNP05981 417 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ALDH3B1P43353 468 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 JMJD6Q6NYC1 403 aaPredicted RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
MSH6-215ENST00000622629 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 APCDD1LQ8NCL9 501 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 ANXA10Q9UJ72 324 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 TNFSF18Q9UNG2 199 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 PPP1R3CQ9UQK1 317 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 A0A0J9YW62 118 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 RAMP1O60894 148 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 OR2A4O95047 310 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 PJVKQ0ZLH3 352 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 OR5B12Q96R08 314 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 OR2A7Q96R45 310 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 CBY1Q9Y3M2 126 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 A0A1W2PQM1 296 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 RNASEK-C17orf49H0YIS7 233 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
MSH6-215ENST00000622629 S100PP25815 95 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 GABRA2P47869 451 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 CCL11P51671 97 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 FDX2Q6P4F2 183 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 PTX4Q96A99 478 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ZNF285Q96NJ3 590 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 TIMP4Q99727 224 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 SOX7Q9BT81 388 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
MSH6-215ENST00000622629 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ARGFXA6NJG6 315 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 UMAD1C9J7I0 102 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ISG15P05161 165 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 PPIAP62937 165 aaKnown RBP11.29□□□□□ -0.6
MSH6-215ENST00000622629 SLC10A1Q14973 349 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 FN3KRPQ9HA64 309 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 FAM206AQ9NX38 181 aa11.29□□□□□ -0.6
MSH6-215ENST00000622629 SHOXO15266 292 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 SRD5A2P31213 254 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 OR2B8PP59922 312 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 PLAURQ03405 335 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 TSC22D1Q15714 1073 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 NPAS1Q99742 590 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 PIPOXQ9P0Z9 390 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
MSH6-215ENST00000622629 ZNF724A8MTY0 619 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 ATG12O94817 140 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 ONECUT2O95948 504 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 CST4P01036 141 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 GSK3AP49840 483 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 TMEM33P57088 247 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 ADPRHL1Q8NDY3 354 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 GNG12Q9UBI6 72 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
MSH6-215ENST00000622629 NBASA2RRP1 2371 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 TRAF3IP2O43734 574 aaPredicted RBP11.28□□□□□ -0.6
MSH6-215ENST00000622629 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms