RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PLATP00750 562 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 APOA1P02647 267 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 CSTBP04080 98 aaKnown RBP6.78□□□□□ -1.32
CPNE3-209ENST00000620393 SFTPBP07988 381 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RAB6AP20340 208 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 TNFSF8P32971 234 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 S100A5P33763 92 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 NPBWR2P48146 333 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ERVK11-1P61568 191 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 CCL8P80075 99 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 PLA2G7Q13093 441 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 LSAMPQ13449 338 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RSU1Q15404 277 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 TESK1Q15569 626 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ELP2Q6IA86 826 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 WDR82Q6UXN9 313 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF826PQ6ZT77 177 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 CMTM4Q8IZR5 234 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 SAMD12Q8N8I0 201 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM104Q8NE00 496 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 OR10K1Q8NGX5 313 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 OR10Z1Q8NGY1 313 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 LGALS14Q8TCE9 139 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 Q8TCH9 128 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 MRPS24Q96EL2 167 aaKnown RBP6.78□□□□□ -1.32
CPNE3-209ENST00000620393 S100A16Q96FQ6 103 aaKnown RBP6.78□□□□□ -1.32
CPNE3-209ENST00000620393 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 WDFY2Q96P53 400 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RAB1BQ9H0U4 201 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 CST11Q9H112 138 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ABCG5Q9H222 651 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 MIXL1Q9H2W2 232 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 FN3KRPQ9HA64 309 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ELL3Q9HB65 397 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RHOFQ9HBH0 211 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 UFSP2Q9NUQ7 469 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 C1orf123Q9NWV4 160 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 ADAM30Q9UKF2 790 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 LAMP3Q9UQV4 416 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 ICE1Q9Y2F5 2266 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 A0A1W2PP11 408 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 METTL21EPA6NDL7 271 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 F8VVB4 439 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 F8VWA3 439 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 OVOL3O00110 214 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 TPD52L2O43399 206 aaKnown RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 CRTAPO75718 401 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 MPIG6BO95866 241 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 LHBP01229 141 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 HPXP02790 462 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 CHRM2P08172 466 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 PGA5P0DJD9 388 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 GTF2F2P13984 249 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 ELK1P19419 428 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 BCL3P20749 454 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SERPINA2P20848 420 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SSTR2P30874 369 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 EFNB2P52799 333 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 UNC119Q13432 240 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 FAM189A2Q15884 450 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF181Q2M3W8 571 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 UBE2NLQ5JXB2 153 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 LRRC28Q86X40 367 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 Q8IYB0 196 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 OSR2Q8N2R0 312 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 FAM89BQ8N5H3 189 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 OR51T1Q8NGJ9 327 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 OR11L1Q8NGX0 322 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 NEU4Q8WWR8 484 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 IGFBPL1Q8WX77 278 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 RAB40AQ8WXH6 277 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SLAMF9Q96A28 289 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SLC25A38Q96DW6 304 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 CEP19Q96LK0 163 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 VRK1Q99986 396 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SOSTQ9BQB4 213 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 NRIP2Q9BQI9 281 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 URM1Q9BTM9 101 aaKnown RBP6.77□□□□□ -1.33
CPNE3-209ENST00000620393 TM2D1Q9BX74 207 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 CACNG6Q9BXT2 260 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 KCNK15Q9H427 330 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 BANF2Q9H503 90 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 SAP30LQ9HAJ7 183 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 RHBDL2Q9NX52 303 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 RASL12Q9NYN1 266 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 RNF7Q9UBF6 113 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 PPP1R3CQ9UQK1 317 aa6.77□□□□□ -1.33
CPNE3-209ENST00000620393 COL12A1Q99715 3063 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 A0A0A6YYH2 397 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 hCG_1807616A0A1W2PRN6 198 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 A6NJ64 397 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FAM25AB3EWG3 89 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FAM25CB3EWG5 89 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FAM25GB3EWG6 89 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms