RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 POU2F2P09086 479 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 MRPL54Q6P161 138 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 TGIF2LYQ8IUE0 185 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 LURAP1LQ8IV03 231 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 RIMKLAQ8IXN7 391 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF816Q0VGE8 651 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 GAMTQ14353 236 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 HFEQ30201 348 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 PWWP2BQ6NUJ5 590 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 VASH2Q86V25 355 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 PUSL1Q8N0Z8 303 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 GPR34Q9UPC5 381 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 CADP27708 2225 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 ATF1P18846 271 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 SCAND1P57086 179 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 ENTPD2Q9Y5L3 495 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 A0A0J9YY10 115 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 LOC390937A0A1W2PQ73 354 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 HIST1H1DP16402 221 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 RPS15P62841 145 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 C17orf67Q0P5P2 114 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 IRF7Q92985 503 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 WDR83Q9BRX9 315 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 STARD10Q9Y365 291 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 R4GMQ9 66 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 LAIR1Q6GTX8 287 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 PIANPQ8IYJ0 282 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 RPEQ96AT9 228 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 DGAT2L7PQ6IED9 249 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 OR13C6PQ8NH95 151 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 A0A1B0GWB2 263 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF716A6NP11 495 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 C1QTNF9BB2RNN3 333 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 DNAL4O96015 105 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 RBM11P57052 281 aaKnown RBP13.52□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM176BQ3YBM2 270 aaPredicted RBP13.52□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF628Q5EBL2 1059 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 PDPNQ86YL7 162 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 H3BMH7 237 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 FAHP16930 419 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 P2RY1P47900 373 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM255AQ5JRV8 349 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM204Q9BSN7 226 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 OBP2AQ9NY56 170 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.24
COL5A1-208ENST00000618395 M0R082 166 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 EIF1BO60739 113 aaKnown RBP13.52□□□□□ -0.25
COL5A1-208ENST00000618395 HLA-DRB1P01911 266 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 RPL27P61353 136 aaKnown RBP13.52□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM230Q96A57 120 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM262E9PQX1 116 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 TMPRSS11DO60235 418 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 PRKRAO75569 313 aaKnown RBP13.52□□□□□ -0.25
COL5A1-208ENST00000618395 PKDCCQ504Y2 493 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 TXNIPQ9H3M7 391 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 GPR84Q9NQS5 396 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 INSL6Q9Y581 213 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 SP6Q3SY56 376 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 CNEP1R1Q8N9A8 125 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 BEND2Q8NDZ0 799 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 OR1L1Q8NH94 360 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 WNT6Q9Y6F9 365 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 CA3P07451 260 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 GRPP07492 148 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 CLEC4DQ8WXI8 215 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-208ENST00000618395 DECR2Q9NUI1 292 aa13.52□□□□□ -0.25
COL5A1-208ENST00000618395 SLC2A10O95528 541 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 MOSPD3O75425 235 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 CTSCP53634 463 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 ROM1Q03395 351 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 TUSC5Q8IXB3 177 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 LINC00587B1AMM8 73 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 GLULP15104 373 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 MYOGP15173 224 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 RPL30P62888 115 aaKnown RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 SCCPDHQ8NBX0 429 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 H1FXQ92522 213 aaKnown RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 CLDN23Q96B33 292 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 SLC7A10Q9NS82 523 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 ST3GAL6Q9Y274 331 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 A0A1W2PPC4 97 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 LEPROTL1O95214 131 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 ZBTB25P24278 435 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 TBC1D28Q2M2D7 210 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 ZNF502Q8TBZ5 544 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms