RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 GMFBP60983 142 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 UBE2NP61088 152 aaKnown RBP17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PLAC9Q5JTB6 97 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 RGS7BPQ6MZT1 257 aaPredicted RBP17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TMUB2Q71RG4 321 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PNLDC1Q8NA58 520 aaKnown RBP17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 OR4D10Q8NGI6 311 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 KCNG3Q8TAE7 436 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PROCRQ9UNN8 238 aa17.75■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ZNF850A8MQ14 1090 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 F5H5P2 479 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SPRY1O43609 319 aaPredicted RBP17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PLATP00750 562 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GNB3P16520 340 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MOB3CQ70IA8 216 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 OR2AK2Q8NG84 335 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 BOD1Q96IK1 185 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TMEM59Q9BXS4 323 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SELENOIQ9C0D9 397 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 KCNK7Q9Y2U2 307 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 FIGNL2A6NMB9 653 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SERPINA2P20848 420 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TMEM50BP56557 158 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MRPL21Q7Z2W9 205 aaKnown RBP17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CHST4Q8NCG5 386 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 OR52B4Q8NGK2 314 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 OR10R2Q8NGX6 335 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PFDN2Q9UHV9 154 aa17.74■□□□□ 0.43
CNTNAP3B-212ENST00000617422 RLN1P04808 185 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 NMBP08949 121 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CNN3Q15417 329 aaKnown RBP17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CDNFQ49AH0 187 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SPATA46Q5T0L3 261 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PLCXD3Q63HM9 321 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 RAB12Q6IQ22 244 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 DVL3Q92997 716 aaPredicted RBP17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SNRNP40Q96DI7 357 aaKnown RBP17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 IGKV1-12A0A0C4DH73 117 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 KRBOX1C9JBD0 128 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ARPC5O15511 151 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 IGKV1D-12P01611 117 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 LPLP06858 475 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 UBBP0CG47 229 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GTF2F2P13984 249 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 RBP2P50120 134 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MALLQ13021 153 aa17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ZNF474Q6S9Z5 364 aaPredicted RBP17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ALX4Q9H161 411 aaPredicted RBP17.73■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TMEM225BP0DP42 221 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MGMTP16455 207 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TIMP3P35625 211 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 NUP62P37198 522 aaPredicted RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 RPS27AP62979 156 aaKnown RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 OVCH2Q7RTZ1 564 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 DOLPP1Q86YN1 238 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 BHLHE23Q8NDY6 225 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 C1orf162Q8NEQ5 155 aaPredicted RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 NUDCD2Q8WVJ2 157 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 HPSE2Q8WWQ2 592 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 BORCS8Q96FH0 119 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PAPOLGQ9BWT3 736 aaKnown RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 FOXI3A8MTJ6 420 aaPredicted RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 C1QTNF9BB2RNN3 333 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 IL2RAP01589 272 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MELTFP08582 738 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 HOXD4P09016 255 aaPredicted RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 C1QTNF9P0C862 333 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GLI4P10075 376 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ZNF35P13682 527 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PTGER4P35408 488 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 H2BFSP57053 126 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ACTBP60709 375 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ERVS71-1P61550 626 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ACTG1P63261 375 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 TBC1D28Q2M2D7 210 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GSG1LQ6UXU4 331 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CALHM1Q8IU99 346 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CCDC36Q8IYA8 594 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 FAM89BQ8N5H3 189 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ARL6Q9H0F7 186 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ELL3Q9HB65 397 aaPredicted RBP17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ASF1BQ9NVP2 202 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GHRLQ9UBU3 117 aa17.72■□□□□ 0.43
CNTNAP3B-212ENST00000617422 NBEAQ8NFP9 2946 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CD300LBA8K4G0 201 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SULT1C2O00338 296 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 GOSR2O14653 212 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 SSX5O60225 188 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 IGKV3-15P01624 115 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CD3DP04234 171 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CEACAM8P31997 349 aaPredicted RBP17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 PRDX4Q13162 271 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 LHFPL2Q6ZUX7 228 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 MUC20Q8N307 709 aaPredicted RBP17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 CCDC107Q8WV48 283 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 ZNF581Q9P0T4 197 aa17.71■□□□□ 0.43
CNTNAP3B-212ENST00000617422 FXYD6-FXYD2A0A087WZ82 144 aa17.7■□□□□ 0.42
CNTNAP3B-212ENST00000617422 SMPD2O60906 423 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms