RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 VWC2LB2RUY7 222 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 F8VVB4 439 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 F8VWA3 439 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 LGALS8O00214 317 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 NXPH2O95156 264 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 CDRT1O95170 752 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 ACAA1P09110 424 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 CLEC2LP0C7M8 214 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 CD37P11049 281 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 RAB3BP20337 219 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 BCL3P20749 454 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 SDC2P34741 201 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 TGFBR1P36897 503 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 NR4A2P43354 598 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 PSMD7P51665 324 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR10A3P58181 314 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 SLC16A12Q6ZSM3 486 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 LRRC28Q86X40 367 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 SAXO1Q8IYX7 474 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR4D6Q8NGJ1 314 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 NRIP2Q9BQI9 281 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 UQCC2Q9BRT2 126 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 NARFLQ9H6Q4 476 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 TMEM165Q9HC07 324 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 SMURF1Q9HCE7 757 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 V9GY05 133 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 OOEPA6NGQ2 149 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 KDM4BO94953 1096 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 GABARAPO95166 117 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 CALCBP10092 127 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 SLC25A16P16260 332 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 VBP1P61758 197 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 NCS1P62166 190 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 MXD1Q05195 221 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 C1orf100Q5SVJ3 147 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 GLIPR1L1Q6UWM5 242 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 ASCL4Q6XD76 172 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 ACP7Q6ZNF0 438 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR5T2Q8NGG2 359 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 S100A13Q99584 98 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 METTL9Q9H1A3 318 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 RASL12Q9NYN1 266 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
PCDHGC3-204ENST00000617222 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 HTR3BO95264 441 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 SFTPBP07988 381 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 HTR2CP28335 458 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 CAV3P56539 151 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 RSU1Q15404 277 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 CTF1Q16619 201 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 MICBQ29980 383 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 AWAT2Q6E213 333 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 FAM58AQ8N1B3 248 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 EMG1Q92979 244 aaKnown RBP13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 TMEM246Q9BRR3 403 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 PLGRKTQ9HBL7 147 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 NLKQ9UBE8 527 aa13.08□□□□□ -0.32
PCDHGC3-204ENST00000617222 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 SLC17A2O00624 439 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 FSTL3O95633 263 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 GYPAP02724 150 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 MUC1P15941 1255 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 PRKACAP17612 351 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 SERPINB10P48595 397 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 BLMHQ13867 455 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 P2RY14Q15391 338 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 RAB11BQ15907 218 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 SMIM21Q3B7S5 101 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 ZNF404Q494X3 552 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 SLC22A6Q4U2R8 563 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 TMEM155Q4W5P6 130 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 HES5Q5TA89 166 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 NR2C2APQ86WQ0 139 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 Q8IYB0 196 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 GAL3ST1Q99999 423 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 REG4Q9BYZ8 158 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 CSMD2Q7Z408 3487 aa13.07□□□□□ -0.32
PCDHGC3-204ENST00000617222 A0A0G2JK05 382 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 NOTOA8MTQ0 251 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 SLC22A1O15245 554 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 TFF1P04155 84 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 PSG2P11465 335 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms