RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FGF14Q92915 247 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 RAB39BQ96DA2 213 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 SCGB3A2Q96PL1 93 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 HSF4Q9ULV5 492 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 SLC7A11Q9UPY5 501 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 NCOA6Q14686 2063 aaPredicted RBP11.59□□□□□ -0.55
MSH6-214ENST00000616033 A0A1W2PNR3 127 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 FAM157AC9JC47 383 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 GEMIN2O14893 280 aaKnown RBP11.58□□□□□ -0.55
MSH6-214ENST00000616033 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.55
MSH6-214ENST00000616033 FAHP16930 419 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 SPINK2P20155 84 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 CSNK1EP49674 416 aaKnown RBP11.58□□□□□ -0.55
MSH6-214ENST00000616033 RUNX1Q01196 453 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 RHEBQ15382 184 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 TMEM268Q5VZI3 342 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 C5orf24Q7Z6I8 188 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 NECAP1Q8NC96 275 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 SNX22Q96L94 193 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 GNRHR2Q96P88 292 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 PBDC1Q9BVG4 233 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 GOLT1BQ9Y3E0 138 aa11.58□□□□□ -0.55
MSH6-214ENST00000616033 FRYQ5TBA9 3013 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 H3BQ15 152 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 IL33O95760 270 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 SOD3P08294 240 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 NKAIN1Q4KMZ8 207 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 RTL6Q6ICC9 239 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 Q8WTZ3 238 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 FAAP24Q9BTP7 215 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 WWTR1Q9GZV5 400 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 H3BP45 60 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 TAAR5O14804 337 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 IFNA10P01566 189 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 NTSR1P30989 418 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 CLRN1P58418 232 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 TNFRSF9Q07011 255 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 DLX2Q07687 328 aaPredicted RBP11.58□□□□□ -0.56
MSH6-214ENST00000616033 FUT7Q11130 342 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.58□□□□□ -0.56
MSH6-214ENST00000616033 SLC25A24Q6NUK1 477 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 VHLLQ6RSH7 139 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 OPN5Q6U736 354 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 ZNF705AQ6ZN79 300 aaPredicted RBP11.58□□□□□ -0.56
MSH6-214ENST00000616033 ZNF610Q8N9Z0 462 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 OR8B12Q8NGG6 310 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 CYP8B1Q9UNU6 501 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 PCDH15Q96QU1 1955 aa11.58□□□□□ -0.56
MSH6-214ENST00000616033 HPNP05981 417 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 ZNF239Q16600 458 aaKnown RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 HS3ST3B1Q9Y662 390 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 SLCO1B1Q9Y6L6 691 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 FAM230AA0A1W2PPH8 454 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 PRR19A6NJB7 356 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 TMEM14DPA8MWL7 114 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 IFNL4K9M1U5 179 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 SPRY1O43609 319 aaPredicted RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 DEDDO75618 318 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 TNFP01375 233 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 CHRM2P08172 466 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 MMP9P14780 707 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 HNRNPA2B1P22626 353 aaKnown RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 DLK1P80370 383 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 HSF1Q00613 529 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 SPIN3Q5JUX0 258 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 DNM1P34Q6PK57 102 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 PGAM5Q96HS1 289 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 ADAM19Q9H013 955 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 BCO1Q9HAY6 547 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 FAM206AQ9NX38 181 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 KCNIP3Q9Y2W7 256 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 SMCO3A2RU48 225 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 PHF1O43189 567 aaPredicted RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H1BP16401 226 aaKnown RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 POLR2HP52434 150 aaKnown RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 ERVFRD-1P60508 538 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 QRFPP83859 136 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 LANCL3Q6ZV70 420 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 NEU1Q99519 415 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 EGLN1Q9GZT9 426 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 CHST11Q9NPF2 352 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 OR14J1Q9UGF5 321 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 SUSD2Q9UGT4 822 aa11.57□□□□□ -0.56
MSH6-214ENST00000616033 MCTS1Q9ULC4 181 aaKnown RBP11.57□□□□□ -0.56
MSH6-214ENST00000616033 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 AKT2P31751 481 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 CDX1P47902 265 aaPredicted RBP11.56□□□□□ -0.56
MSH6-214ENST00000616033 ARL4DP49703 201 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HMGN3Q15651 99 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 PCK2Q16822 640 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 FNDC7Q5VTL7 733 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 OR5T1Q8NG75 326 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 OR10S1Q8NGN2 331 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 RLN3Q8WXF3 142 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 EMG1Q92979 244 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms