RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 COL27A1Q8IZC6 1860 aaPredicted RBP14.98□□□□□ -0.01
NEK3-206ENST00000611833 B4E171 279 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 ATP6V1G2-DDX39BF2Z307 99 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 IFNA21P01568 189 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 TSPAN7P41732 249 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 PSG4Q00888 419 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 STK11Q15831 433 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 FAM122CQ6P4D5 195 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 FOXB1Q99853 325 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 NECAP2Q9NVZ3 263 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 PCSK5Q92824 1860 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 OR6C6A6NF89 314 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 FAM74A7A6NL05 159 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 ABCD4O14678 606 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 ACTL6AO96019 429 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 FAM157CP0CG43 387 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 TCN2P20062 427 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 EIF5AP63241 154 aaKnown RBP14.97□□□□□ -0.01
NEK3-206ENST00000611833 LPAL2Q16609 132 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 CEACAM16Q2WEN9 425 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 DCAF12Q5T6F0 453 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.97□□□□□ -0.01
NEK3-206ENST00000611833 C1orf210Q8IVY1 113 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 OR2V1Q8NHB1 315 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 CNTNAP3BQ96NU0 1288 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 CNTNAP3Q9BZ76 1288 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 DEPPQ9NTK1 212 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 ZNF581Q9P0T4 197 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 PRELID1Q9Y255 219 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 CRYM-AS1A6NIL9 109 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 NUDT19A8MXV4 375 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 SMCO1Q147U7 214 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 TIPARPQ7Z3E1 657 aaKnown RBP14.97□□□□□ -0.01
NEK3-206ENST00000611833 ESX1Q8N693 406 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 TOMM40LQ969M1 308 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 ADGRG7Q96K78 797 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 OR2H1Q9GZK4 316 aa14.97□□□□□ -0.01
NEK3-206ENST00000611833 MSTNO14793 375 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 TAAR5O14804 337 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 CTRB1P17538 263 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 DTYMKP23919 212 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 CLDN15P56746 228 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 PCBD1P61457 104 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 ACER2Q5QJU3 275 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 PDSS1Q5T2R2 415 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 CTRB2Q6GPI1 263 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 BRICD5Q6PL45 260 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 SVBPQ8N300 66 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 SULT4A1Q9BR01 284 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 MMP26Q9NRE1 261 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 LPAR3Q9UBY5 353 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 ZNF629Q9UEG4 869 aaPredicted RBP14.96□□□□□ -0.01
NEK3-206ENST00000611833 SLC7A11Q9UPY5 501 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 KCNIP3Q9Y2W7 256 aa14.96□□□□□ -0.01
NEK3-206ENST00000611833 F8W036 122 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 GPR31O00270 319 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 GEMIN2O14893 280 aaKnown RBP14.95□□□□□ -0.02
NEK3-206ENST00000611833 FCGR3AP08637 254 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 HKR1P10072 659 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ZNF708P17019 499 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 CHATP28329 748 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 PIGPP57054 158 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 BLOC1S1P78537 153 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ZNF169Q14929 603 aaPredicted RBP14.95□□□□□ -0.02
NEK3-206ENST00000611833 PIGYQ3MUY2 71 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ABCA11PQ4W5N1 156 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 RPL7L1Q6DKI1 246 aaKnown RBP14.95□□□□□ -0.02
NEK3-206ENST00000611833 EIF5AL1Q6IS14 154 aaKnown RBP14.95□□□□□ -0.02
NEK3-206ENST00000611833 OSR2Q8N2R0 312 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 CT55Q8WUE5 264 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 WNT5BQ9H1J7 359 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 TAF9BQ9HBM6 251 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 TREM1Q9NP99 234 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ZNF391Q9UJN7 358 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 PINLYPA6NC86 204 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 K7EPK0 472 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 F10P00742 488 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ZNF728P0DKX0 622 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ACP1P24666 158 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 GDF1P27539 372 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 GGNBP1Q5YKI7 109 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ABLIM2Q6H8Q1 611 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 H3F3CQ6NXT2 135 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 FAM71E2Q8N5Q1 922 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 CLRN3Q8NCR9 226 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 FGFBP3Q8TAT2 258 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 ADAMTS17Q8TE56 1095 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 DYRK2Q92630 601 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 HRH4Q9H3N8 390 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 LIME1Q9H400 295 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 RGCCQ9H4X1 137 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 BCO1Q9HAY6 547 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 DECR2Q9NUI1 292 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 LOXL2Q9Y4K0 774 aa14.95□□□□□ -0.02
NEK3-206ENST00000611833 FAM221AA4D161 298 aa14.94□□□□□ -0.02
NEK3-206ENST00000611833 TSPAN9O75954 239 aa14.94□□□□□ -0.02
NEK3-206ENST00000611833 ZNF205O95201 554 aa14.94□□□□□ -0.02
NEK3-206ENST00000611833 RPL12P30050 165 aaKnown RBP14.94□□□□□ -0.02
NEK3-206ENST00000611833 FUT6P51993 359 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms