RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SNRPD2P62316 118 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 GABRA6Q16445 453 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 PCSK4Q6UW60 755 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 BHLHE23Q8NDY6 225 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 PXT1Q8NFP0 134 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 OR51F2Q8NH61 342 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 PLEKHJ1Q9NW61 149 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 LHX6Q9UPM6 363 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 FAM172BPA6NC97 362 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 CD300LBA8K4G0 201 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 AHRRA9YTQ3 701 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 MSTNO14793 375 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 RGS13O14921 159 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 CST4P01036 141 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 TGFBR3Q03167 851 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 LY6DQ14210 128 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 SEM1Q6ZVN7 128 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 HOGA1Q86XE5 327 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 FBXL14Q8N1E6 418 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 BATF2Q8N1L9 274 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 C9orf62Q8N4C0 152 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF611Q8N823 705 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 HDHD3Q9BSH5 251 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 FN3KRPQ9HA64 309 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 MGAT4AQ9UM21 535 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 UBE2QL1A1L167 161 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 GEMIN2O14893 280 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF780AO75290 641 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 CBX5P45973 191 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 GPM6AP51674 278 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 PLEKHN1Q494U1 663 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 SPATA46Q5T0L3 261 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 SLC25A26Q70HW3 274 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 UXS1Q8NBZ7 420 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2T35Q8NGX2 323 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 GRPEL2Q8TAA5 225 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 FAAP24Q9BTP7 215 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 RANBP3Q9H6Z4 567 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 IL36GQ9NZH8 169 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 HSPB11Q9Y547 144 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 IFNA6P05013 189 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 AMY2BP19961 511 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 NPBWR2P48146 333 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 IDH3GP51553 393 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 SNU13P55769 128 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 UBE2NP61088 152 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 ZMYND11Q15326 602 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 CEACAM21Q3KPI0 293 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 NSUN5P2Q63ZY6 315 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 ZDHHC23Q8IYP9 409 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 OSR2Q8N2R0 312 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 CSNK2A3Q8NEV1 391 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 OR6K3Q8NGY3 331 aa14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF431Q8TF32 576 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 EMG1Q92979 244 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 MYOZ1Q9NP98 299 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-216ENST00000598201 IGKV1D-8A0A087WSZ0 117 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 TNFSF13O75888 250 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 TOXO94900 526 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 SIX6O95475 246 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 IL32P24001 234 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 DAZAP2Q15038 168 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 PDCD1Q15116 288 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 VAX1Q5SQQ9 334 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 BRICD5Q6PL45 260 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 ASCC1Q8N9N2 400 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2AK2Q8NG84 335 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 CCDC107Q8WV48 283 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 GTF3C1Q12789 2109 aa14.63□□□□□ -0.07
SHKBP1-216ENST00000598201 CA11O75493 328 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 CNOT4O95628 575 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 COX5AP20674 150 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 DNASE1P24855 282 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 CHATP28329 748 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 H2BFSP57053 126 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 TBC1D28Q2M2D7 210 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 RPUSD3Q6P087 351 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR10AD1Q8NGE0 317 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 SULT4A1Q9BR01 284 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OPA3Q9H6K4 179 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ST3GAL6Q9Y274 331 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF732B4DXR9 585 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2A4O95047 310 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 HAAOP46952 286 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 DHRS2Q13268 280 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ARL6IP1Q15041 203 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ACTBL2Q562R1 376 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 RTL6Q6ICC9 239 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2T2Q6IF00 324 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2A2Q6IF42 318 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ZDHHC22Q8N966 263 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR5H2Q8NGV7 314 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 DYRK2Q92630 601 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2A7Q96R45 310 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 C1QTNF6Q9BXI9 259 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 PLSCR4Q9NRQ2 329 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF701Q9NV72 531 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 AK3Q9UIJ7 227 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 HSF4Q9ULV5 492 aa14.62□□□□□ -0.07
SHKBP1-216ENST00000598201 BSNQ9UPA5 3926 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms