RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 H0YHG0 523 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SLC1A7O00341 560 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SIGLEC5O15389 551 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 RGS9O75916 674 aaPredicted RBP9.21□□□□□ -0.94
VRK3-210ENST00000596121 IFNA2P01563 188 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 IGKV1D-12P01611 117 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SFTPBP07988 381 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 MMP9P14780 707 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ZNF20P17024 532 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 MYL12AP19105 171 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 EPHA1P21709 976 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 MYF6P23409 242 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 GABRA2P47869 451 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 NPBWR2P48146 333 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SOX2P48431 317 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 FGF12P61328 243 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 RPS11P62280 158 aaKnown RBP eCLIP9.21□□□□□ -0.94
VRK3-210ENST00000596121 CCDC58Q4VC31 144 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ZNF529Q6P280 563 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 RPL22L1Q6P5R6 122 aaKnown RBP9.21□□□□□ -0.94
VRK3-210ENST00000596121 TMPRSS11AQ6ZMR5 421 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SLC25A26Q70HW3 274 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 PARP16Q8N5Y8 322 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 NANOGP1Q8N7R0 232 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ZNRF1Q8ND25 227 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 LY6G5BQ8NDX9 201 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 DNAAF1Q8NEP3 725 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 NANPQ8TBE9 248 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 C22orf15Q8WYQ4 148 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 RFT1Q96AA3 541 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 SDSLQ96GA7 329 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 TBX15Q96SF7 602 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ANKRD60Q9BZ19 345 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ELL3Q9HB65 397 aaPredicted RBP9.21□□□□□ -0.94
VRK3-210ENST00000596121 RASL12Q9NYN1 266 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 IL36RNQ9UBH0 155 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 ZNF69Q9UC07 566 aa9.21□□□□□ -0.94
VRK3-210ENST00000596121 RPUSD1Q9UJJ7 312 aaKnown RBP9.21□□□□□ -0.94
VRK3-210ENST00000596121 ZNF879B4DU55 563 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 SPRY1O43609 319 aaPredicted RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 NDUFB3O43676 98 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 NXPH2O95156 264 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 VENTXO95231 258 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 SERPINA3P01011 423 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 MT-ND2P03891 347 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 CDK1P06493 297 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 CALCBP10092 127 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 PRDX2P32119 198 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 MTCP1P56278 107 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 IL13RA1P78552 427 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 PRB3Q04118 309 aaPredicted RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 CNN3Q15417 329 aaKnown RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 KRTAP24-1Q3LI83 254 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 CD276Q5ZPR3 534 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 BTNL3Q6UXE8 466 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 SLC36A1Q7Z2H8 476 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 OR51A2Q8NGJ7 313 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 GHSRQ92847 366 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 UPRTQ96BW1 309 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 PGLYRP3Q96LB9 341 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 MYCBPQ99417 103 aaPredicted RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 NKX3-1Q99801 234 aaPredicted RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 SLC6A7Q99884 636 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 DCTN5Q9BTE1 182 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 MRI1Q9BV20 369 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 SIRPDQ9H106 197 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 DNTTIP1Q9H147 329 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 ZCCHC4Q9H5U6 513 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 DHDHQ9UQ10 334 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 POLDIP2Q9Y2S7 368 aa9.2□□□□□ -0.94
VRK3-210ENST00000596121 LSM2Q9Y333 95 aaKnown RBP9.2□□□□□ -0.94
VRK3-210ENST00000596121 TRBV5-5A0A0J9YX44 114 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 ANGPTL7O43827 346 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ECDO95905 644 aaPredicted RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 PPIAL4GP0DN37 164 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 BCL3P20749 454 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 PRKACBP22694 351 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 POU3F4P49335 361 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 RBP2P50120 134 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ATP1B3P54709 279 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 DLX1P56177 255 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ZP1P60852 638 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ARF6P62330 175 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 SLC35A2P78381 396 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 PDZK1IP1Q13113 114 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 IRF3Q14653 427 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 STX19Q8N4C7 294 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 Q8N7P7 452 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 OR5D18Q8NGL1 313 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 HAVCR2Q8TDQ0 301 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 TSEN15Q8WW01 171 aaKnown RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 SPSB1Q96BD6 273 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 SMIM19Q96E16 107 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms