RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZSCAN4Q8NAM6 433 aaPredicted RBP18.89■□□□□ 0.61
SNRNP70-204ENST00000595231 CNTD2Q9H8S5 307 aa18.89■□□□□ 0.61
SNRNP70-204ENST00000595231 HES4Q9HCC6 221 aa18.89■□□□□ 0.61
SNRNP70-204ENST00000595231 GSTK1Q9Y2Q3 226 aa18.89■□□□□ 0.61
SNRNP70-204ENST00000595231 AK6Q9Y3D8 172 aaKnown RBP18.89■□□□□ 0.61
SNRNP70-204ENST00000595231 IGHV4-61A0A0C4DH41 118 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 OOEPA6NGQ2 149 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 LGALS8O00214 317 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 AIREO43918 545 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 TMEM225BP0DP42 221 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 GLRA1P23415 457 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 TIMM50Q3ZCQ8 353 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 ASCL4Q6XD76 172 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 FAM90A1Q86YD7 464 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 DEFB108BQ8NET1 73 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 TNFAIP8L1Q8WVP5 186 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 CEP19Q96LK0 163 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 REG4Q9BYZ8 158 aa18.88■□□□□ 0.61
SNRNP70-204ENST00000595231 CREBBPQ92793 2442 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 IGHV3OR15-7A0A075B7D8 119 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 RNF223E7ERA6 249 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 TNFRSF13BO14836 293 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 MDH2P40926 338 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 ZNF404Q494X3 552 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 SPNS3Q6ZMD2 512 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 GPR141Q7Z602 305 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 PXT1Q8NFP0 134 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 OR4D6Q8NGJ1 314 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 TMEM246Q9BRR3 403 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 UQCC2Q9BRT2 126 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 RASL12Q9NYN1 266 aa18.87■□□□□ 0.61
SNRNP70-204ENST00000595231 ISPDA4D126 451 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 KDM4BO94953 1096 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 CYB5AP00167 134 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 SFTPBP07988 381 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 MUC1P15941 1255 aaPredicted RBP18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 BCL3P20749 454 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 TMEM155Q4W5P6 130 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 ACP7Q6ZNF0 438 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 SLC16A12Q6ZSM3 486 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 FOXRED1Q96CU9 486 aaPredicted RBP18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 KCTD7Q96MP8 289 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 NAA50Q9GZZ1 169 aaKnown RBP18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 NARFLQ9H6Q4 476 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 SMURF1Q9HCE7 757 aa18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 RBFOX1Q9NWB1 397 aaKnown RBP18.86■□□□□ 0.61
SNRNP70-204ENST00000595231 TRAV38-1A0A0B4J264 116 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 CDRT1O95170 752 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 MYL9P24844 172 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 TGFBR1P36897 503 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 MICBQ29980 383 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 C1orf100Q5SVJ3 147 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 GLT8D1Q68CQ7 371 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 NR2C2APQ86WQ0 139 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 ANKRD13BQ86YJ7 626 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 CIARTQ8N365 385 aaPredicted RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 PNLDC1Q8NA58 520 aaKnown RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 OR5T2Q8NGG2 359 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 CLDND2Q8NHS1 167 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 FAM192AQ9GZU8 254 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 TRAPPC2LH3BP13 241 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 NXPH2O95156 264 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 USF1P22415 310 aaPredicted RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 MTNR1BP49286 362 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 OR10A3P58181 314 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 LSM3P62310 102 aaKnown RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 FAM166AQ6J272 317 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 MUC20Q8N307 709 aaPredicted RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 C12orf43Q96C57 262 aaKnown RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 C1orf147Q96MC9 270 aaPredicted RBP18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 NLKQ9UBE8 527 aa18.85■□□□□ 0.61
SNRNP70-204ENST00000595231 CR1P17927 2039 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 FLNAP21333 2647 aaKnown RBP18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 AMY2BP19961 511 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 LMO4P61968 165 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 LOXL1Q08397 574 aaPredicted RBP18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 GPR107Q5VW38 600 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 LYPD2Q6UXB3 125 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 Q8IYB0 196 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 Q8NFD4 153 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 GAL3ST1Q99999 423 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 DNAJB11Q9UBS4 358 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 V9GY05 133 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 MAST4O15021 2626 aa18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 YLPM1P49750 1951 aaKnown RBP18.84■□□□□ 0.61
SNRNP70-204ENST00000595231 MED13LQ71F56 2210 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 OR2AT4A6NND4 320 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 GYPAP02724 150 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 CALCBP10092 127 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 PSG2P11465 335 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 RAB3BP20337 219 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 SDC2P34741 201 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 STUMQ69YW2 141 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 TPRA1Q86W33 373 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 MAPK1IP1LQ8NDC0 245 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 ANGPTL6Q8NI99 470 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 RHOFQ9HBH0 211 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 IL36RNQ9UBH0 155 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 ING4Q9UNL4 249 aa18.83■□□□□ 0.61
SNRNP70-204ENST00000595231 MRPS28Q9Y2Q9 187 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms