RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 RAP1BP61224 184 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 EIF2B1Q14232 305 aaKnown RBP13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
PNKP-204ENST00000594661 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 SLC25A42Q86VD7 318 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 ZSCAN4Q8NAM6 433 aaPredicted RBP13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 TMEM106AQ96A25 262 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 C20orf24Q9BUV8 137 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 SCRT1Q9BWW7 348 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 B3GALT5Q9Y2C3 310 aa13.51□□□□□ -0.25
PNKP-204ENST00000594661 A0A1W2PNV4 684 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 ZNF814B7Z6K7 855 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 CTAG2O75638 210 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 MPZL1O95297 269 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 OR2C1O95371 312 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 MAS1P04201 325 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 LYL1P12980 280 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 FMODQ06828 376 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 TMEM176BQ3YBM2 270 aaPredicted RBP13.5□□□□□ -0.25
PNKP-204ENST00000594661 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
PNKP-204ENST00000594661 COMMD1Q8N668 190 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 OR8S1Q8NH09 359 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 PSMF1Q92530 271 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 KNTC1P50748 2209 aa13.5□□□□□ -0.25
PNKP-204ENST00000594661 TRAV8-7A0A075B6U6 113 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 A0A087WZY1 265 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 TRBV5-7A0A0A0MS05 114 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 NPIPB13A6NJU9 1138 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 C21orf140B9A014 251 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 NPIPB4C9JG80 1138 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 LRP3O75074 770 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 CRTAPO75718 401 aaPredicted RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 KLK2P20151 261 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 DNASE1L1P49184 302 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 UCP2P55851 309 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 TMPRSS12Q86WS5 348 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 LRRC18Q8N456 261 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 DEFB124Q8NES8 71 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 SLC25A43Q8WUT9 341 aaPredicted RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 TSEN15Q8WW01 171 aaKnown RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 HPSE2Q8WWQ2 592 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 SGCZQ96LD1 299 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 ABHD6Q9BV23 337 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 GPR87Q9BY21 358 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 NMES1Q9C002 83 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 IGKV1D-43A0A0B4J1Z2 117 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 ZIC3O60481 467 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 DSCR4P56555 118 aaPredicted RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 ROM1Q03395 351 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 JOSD1Q15040 202 aaPredicted RBP13.49□□□□□ -0.25
PNKP-204ENST00000594661 SCGB2B2Q4G0G5 96 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 ZNF227Q86WZ6 799 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 OR8U1Q8NH10 309 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 ST7LQ8TDW4 575 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 AQP10Q96PS8 301 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 PHB2Q99623 299 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 SLC22A13Q9Y226 551 aa13.49□□□□□ -0.25
PNKP-204ENST00000594661 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 EIF1AYO14602 144 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 RAMP1O60894 148 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 PNPP00491 289 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 ZNF823P16415 610 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 EIF1AXP47813 144 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 BIDP55957 195 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 RAET1LQ5VY80 246 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 OR13C8Q8NGS7 320 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 OR13D1Q8NGV5 346 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 ROBO4Q8WZ75 1007 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 THOC3Q96J01 351 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 IL17BQ9UHF5 180 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 MRPS18CQ9Y3D5 142 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 LRP12Q9Y561 859 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 DOCK10Q96BY6 2186 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 CYTIPO60759 359 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 AMY2AP04746 511 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 SERPINA5P05154 406 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 MFGE8Q08431 387 aaPredicted RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 TCF15Q12870 199 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms