RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 HIST1H1CP16403 213 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 SELEP16581 610 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 BCL3P20749 454 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ALDH3A1P30838 453 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 GNRHRP30968 328 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CEACAM8P31997 349 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ACVRL1P37023 503 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CAV2P51636 162 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 GTF2A1P52655 376 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 AQP5P55064 265 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HMGCS1Q01581 520 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 DLG1Q12959 904 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DS1Q14954 304 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 GUSBP1Q15486 140 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TAB1Q15750 504 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CYP51A1Q16850 503 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 DEFB113Q30KQ7 82 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ACER2Q5QJU3 275 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CCNJQ5T5M9 372 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 PXDC1Q5TGL8 231 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 LPCAT4Q643R3 524 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 IGFL3Q6UXB1 125 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 Q6ZSR6 202 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CCDC121Q6ZUS5 278 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ACOT7LQ6ZUV0 252 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 MRPL52Q86TS9 123 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 LHFPL3Q86UP9 236 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HORMAD1Q86X24 394 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CALHM1Q8IU99 346 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TRAPPC5Q8IUR0 188 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 C10orf67Q8IYJ2 551 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 FAM71AQ8IYT1 594 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 RIBC1Q8N443 379 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 C4orf32Q8N8J7 132 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 OR5L1Q8NGL2 311 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 PCNPQ8WW12 178 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 EEF1AKMT3Q96AZ1 226 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 MS4A14Q96JA4 679 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 BMFQ96LC9 184 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF681Q96N22 645 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 STACQ99469 402 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 EBNA1BP2Q99848 306 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 WACQ9BTA9 647 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HES7Q9BYE0 225 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CHIAQ9BZP6 476 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TCEAL2Q9H3H9 227 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 EHFQ9NZC4 300 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 SLC2A6Q9UGQ3 507 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 SPATA2Q9UM82 520 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 USH1CQ9Y6N9 552 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ABCA1O95477 2261 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 PHF3Q92576 2039 aaKnown RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TRGV8A0A0C4DH27 118 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 IGHV4-61A0A0C4DH41 118 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TRBV5-4A0A0C4DH59 114 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 MEIOCA2RUB1 952 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 FAM166BA8MTA8 275 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 C21orf140B9A014 251 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 C9J4A7 227 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 K7EMT4 169 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 CCRL2O00421 344 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 NME4O00746 187 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 CDIPTO14735 213 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 CDC40O60508 579 aaKnown RBP eCLIP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 SNAP29O95721 258 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 PTTG1O95997 202 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 SERPINA1P01009 418 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TSHBP01222 138 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 IGHV4-59P01825 116 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 OR9G9P0C7N8 305 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 LIMS3P0CW19 117 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 LIMS4P0CW20 117 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TBPP20226 339 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 ME2P23368 584 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 LOXP28300 417 aaPredicted RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 HTR1FP30939 366 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 CD70P32970 193 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 GDF5P43026 501 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 CA7P43166 264 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 PSMD7P51665 324 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 HNRNPA3P51991 378 aaKnown RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 RAP1GDS1P52306 607 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TAS2R31P59538 309 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 SSBP2P81877 361 aaPredicted RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 ILF3Q12906 894 aaKnown RBP eCLIP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 ECH1Q13011 328 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 IL18R1Q13478 541 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 TAF1AQ15573 450 aaPredicted RBP3.38□□□□□ -1.87
LINC00649-204ENST00000593977 SLC9A3R2Q15599 337 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 POU2AF1Q16633 256 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 ZBED5Q49AG3 693 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 AKIRIN2Q53H80 203 aa3.38□□□□□ -1.87
LINC00649-204ENST00000593977 YIF1BQ5BJH7 314 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms