RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 HDHD3Q9BSH5 251 aaPredicted RBP17.01■□□□□ 0.31
CLIP3-206ENST00000593074 COMMD9Q9P000 198 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF581Q9P0T4 197 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 SFT2D2O95562 160 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 DTYMKP23919 212 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF345Q14585 488 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 OR56B2PQ8NGI1 322 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 OR6K3Q8NGY3 331 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 APOBEC3DQ96AK3 386 aaPredicted RBP17■□□□□ 0.31
CLIP3-206ENST00000593074 SEC22AQ96IW7 307 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 FAAP24Q9BTP7 215 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 AK3Q9UIJ7 227 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 A0A0B4J2A0 478 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 SFTPBP07988 381 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 CD79AP11912 226 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 SUPT4H1P63272 117 aaKnown RBP17■□□□□ 0.31
CLIP3-206ENST00000593074 PMP22Q01453 160 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 BAMBIQ13145 260 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 PIGYQ3MUY2 71 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 CLEC18BQ6UXF7 455 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 KCTD9Q7L273 389 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 GP6Q9HCN6 339 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 SHPKQ9UHJ6 478 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 KIF25Q9UIL4 384 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 TNFSF18Q9UNG2 199 aa17■□□□□ 0.31
CLIP3-206ENST00000593074 SLC22A20A6NK97 555 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF850A8MQ14 1090 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 GEMIN2O14893 280 aaKnown RBP16.99■□□□□ 0.31
CLIP3-206ENST00000593074 CCNOP22674 350 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 RAB1AP62820 205 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 DEFB109BQ30KR1 87 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 FBXL14Q8N1E6 418 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 OR10AD1Q8NGE0 317 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 POM121L2Q96KW2 1035 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 SULT4A1Q9BR01 284 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 PCDHB16Q9NRJ7 776 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 GPR160Q9UJ42 338 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 ARHGAP21Q5T5U3 1957 aa16.99■□□□□ 0.31
CLIP3-206ENST00000593074 A0A0D9SG52 128 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF891A8MT65 544 aaPredicted RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CCL2P13500 99 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 RPS2P15880 293 aaKnown RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 PI3P19957 117 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CALCRP30988 508 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ECI1P42126 302 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 RBM11P57052 281 aaKnown RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CLN3Q13286 438 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 RFPL4BQ6ZWI9 263 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CALHM1Q8IU99 346 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF611Q8N823 705 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 OR51F2Q8NH61 342 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 PCNPQ8WW12 178 aaKnown RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 LRFN3Q9BTN0 628 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 DLL3Q9NYJ7 618 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 PRSS50Q9UI38 385 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ANXA10Q9UJ72 324 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CELSR3Q9NYQ7 3312 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 PQLC2LA1A4F0 135 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 FAM25EA8MYX2 175 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 FCGR3AP08637 254 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ARPC4P59998 168 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 MALLQ13021 153 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 LRRC37A5PQ49AS3 106 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 SLC51BQ86UW2 128 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 SCARB1Q8WTV0 552 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 POM121Q96HA1 1249 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 CMSS1Q9BQ75 279 aaKnown RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 PAPOLGQ9BWT3 736 aaKnown RBP16.98■□□□□ 0.31
CLIP3-206ENST00000593074 DECR2Q9NUI1 292 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ST3GAL6Q9Y274 331 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF175Q9Y473 711 aa16.98■□□□□ 0.31
CLIP3-206ENST00000593074 TRAV17A0A0B4J275 112 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 OR2F2O95006 317 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 IL18BPO95998 194 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 RRASP10301 218 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 OR2F1Q13607 317 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 RTP5Q14D33 572 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF660Q6AZW8 331 aaPredicted RBP16.97■□□□□ 0.31
CLIP3-206ENST00000593074 THOC7Q6I9Y2 204 aaKnown RBP16.97■□□□□ 0.31
CLIP3-206ENST00000593074 MRPL21Q7Z2W9 205 aaKnown RBP16.97■□□□□ 0.31
CLIP3-206ENST00000593074 DPPA2Q7Z7J5 298 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 COMMD7Q86VX2 200 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 KCNRGQ8N5I3 272 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 Q8NFD4 153 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 NMES1Q9C002 83 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 OPA3Q9H6K4 179 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 RAB18Q9NP72 206 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 TNRC6AQ8NDV7 1962 aaKnown RBP16.97■□□□□ 0.31
CLIP3-206ENST00000593074 PTPRBP23467 1997 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 CST4P01036 141 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 IGHG3P01860 377 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 SERPINF1P36955 418 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 PRDX4Q13162 271 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 DAZAP2Q15038 168 aaPredicted RBP16.97■□□□□ 0.31
CLIP3-206ENST00000593074 FBXW9Q5XUX1 488 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 OR1K1Q8NGR3 316 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 HPSE2Q8WWQ2 592 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 MARVELD3Q96A59 401 aa16.97■□□□□ 0.31
CLIP3-206ENST00000593074 C12orf49Q9H741 205 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms