RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SNTG1Q9NSN8 517 aa12.47□□□□□ -0.41
DDX39A-221ENST00000593026 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
DDX39A-221ENST00000593026 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 NKX6-3A6NJ46 265 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 OR2AT4A6NND4 320 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 PIN1P1O15428 100 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 SPRY1O43609 319 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-221ENST00000593026 GPX5O75715 221 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 INMTO95050 263 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 GABRA5P31644 462 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 PITPNBP48739 271 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 ERVK11-1P61568 191 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
DDX39A-221ENST00000593026 PDZK1IP1Q13113 114 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 DDI2Q5TDH0 399 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 STUMQ69YW2 141 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 FAM166AQ6J272 317 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 UNQ9370/PRO34162Q6UXP9 181 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 ACP7Q6ZNF0 438 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 Q71RC1 249 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-221ENST00000593026 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 GLCCI1Q86VQ1 547 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 Q8IYB0 196 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 OR5T2Q8NGG2 359 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 OR52N4Q8NGI2 321 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 FOXJ3Q9UPW0 622 aa12.46□□□□□ -0.41
DDX39A-221ENST00000593026 TRAPPC2LH3BP13 241 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
DDX39A-221ENST00000593026 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 ANGPTL7O43827 346 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 FOXH1O75593 365 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SC5DO75845 299 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 RGS9O75916 674 aaPredicted RBP12.45□□□□□ -0.42
DDX39A-221ENST00000593026 ALDOBP05062 364 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 TMEM225BP0DP42 221 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 GNB2P62879 340 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 LCN2P80188 198 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SSX1Q16384 188 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 FAM27D1Q5T7N8 215 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 CRIP3Q6Q6R5 217 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SLC36A1Q7Z2H8 476 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SAXO1Q8IYX7 474 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 TSPAN14Q8NG11 270 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 CCL13Q99616 98 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SSBP3Q9BWW4 388 aaPredicted RBP12.45□□□□□ -0.42
DDX39A-221ENST00000593026 DNTTIP1Q9H147 329 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 HES4Q9HCC6 221 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 TCF7L1Q9HCS4 588 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 NDUFB11Q9NX14 153 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 KAAG1Q9UBP8 84 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 CLN8Q9UBY8 286 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 KCNS2Q9ULS6 477 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 SF3B6Q9Y3B4 125 aaKnown RBP12.45□□□□□ -0.42
DDX39A-221ENST00000593026 ABCA1O95477 2261 aa12.45□□□□□ -0.42
DDX39A-221ENST00000593026 IGKV1D-17A0A075B6S4 117 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 A0A087WXM4 84 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 TRAV20A0A0B4J274 112 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 MAGEA13PA6NCF6 341 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 A8MV72 311 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 CCRL2O00421 344 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 GABRPO00591 440 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 PHF1O43189 567 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 MAS1P04201 325 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 PSG2P11465 335 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ZFP36P26651 326 aaKnown RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF93P35789 620 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 GABRA2P47869 451 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 NPY4RP50391 375 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 DVL1P1P54792 670 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ZP1P60852 638 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 NEDD8Q15843 81 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 HSD17B12Q53GQ0 312 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 PNLDC1Q8NA58 520 aaKnown RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ZSCAN4Q8NAM6 433 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-221ENST00000593026 ANGPTL6Q8NI99 470 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 TMEM186Q96B77 213 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 SMURF1Q9HCE7 757 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 OR5V1Q9UGF6 321 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 CSPG4Q6UVK1 2322 aa12.44□□□□□ -0.42
DDX39A-221ENST00000593026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.425e-15■■■■□ 23.1
DDX39A-221ENST00000593026 IGKV1-12A0A0C4DH73 117 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 RFPL4AA6NLU0 287 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 A8MXK9 166 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 RFPL4AL1F8VTS6 287 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 F8VVB4 439 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 F8VWA3 439 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 KNG1P01042 644 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 IGKV1D-12P01611 117 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 TFF1P04155 84 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 UCHL1P09936 223 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 AMY2BP19961 511 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms