RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	SLC35A2	P78381	396 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	IRF3	Q14653	427 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	CNN3	Q15417	329 aa	Known RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	TMPRSS11A	Q6ZMR5	421 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	DNAAF1	Q8NEP3	725 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	OR51A2	Q8NGJ7	313 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	OR13C9	Q8NGT0	318 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	ST8SIA4	Q92187	359 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	SLAMF9	Q96A28	289 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	TMIGD2	Q96BF3	282 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	MYCBP	Q99417	103 aa	Predicted RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	MDFI	Q99750	246 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	DNTTIP1	Q9H147	329 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	ELL3	Q9HB65	397 aa	Predicted RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	IL36RN	Q9UBH0	155 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	LSM2	Q9Y333	95 aa	Known RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	SOX21	Q9Y651	276 aa	Predicted RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	AUP1	Q9Y679	476 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	COL6A5	A8TX70	2615 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	IGKV1-12	A0A0C4DH73	117 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	IGKV1D-12	P01611	117 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	IGHV4-38-2	P0DP08	117 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	EPHA1	P21709	976 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	NPBWR2	P48146	333 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	SOX2	P48431	317 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	IKZF1	Q13422	519 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	SLC25A26	Q70HW3	274 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	BTN2A1	Q7KYR7	527 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	NANOGP1	Q8N7R0	232 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNRF1	Q8ND25	227 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	LY6G5B	Q8NDX9	201 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	HAVCR2	Q8TDQ0	301 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	RFT1	Q96AA3	541 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	UPRT	Q96BW1	309 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	ORAI1	Q96D31	301 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	BORCS8	Q96FH0	119 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	SDSL	Q96GA7	329 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	OPALIN	Q96PE5	141 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	COMMD4	Q9H0A8	199 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	ZCCHC4	Q9H5U6	513 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	RASL12	Q9NYN1	266 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	SLC7A11	Q9UPY5	501 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	POLDIP2	Q9Y2S7	368 aa		13.46	□□□□□ -0.25
TMC6-223	ENST00000592594	TRBV5-5	A0A0J9YX44	114 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	RFPL4A	A6NLU0	287 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	RFPL4AL1	F8VTS6	287 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SPRY1	O43609	319 aa	Predicted RBP	13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	ENSA	O43768	121 aa	Known RBP	13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SFTPB	P07988	381 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	RBP2	P50120	134 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	ZP1	P60852	638 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	FGF12	P61328	243 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SMIM21	Q3B7S5	101 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SLC36A1	Q7Z2H8	476 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	STX19	Q8N4C7	294 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	TSEN15	Q8WW01	171 aa	Known RBP	13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	GHSR	Q92847	366 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SPSB1	Q96BD6	273 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	TBX15	Q96SF7	602 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	NKX3-1	Q99801	234 aa	Predicted RBP	13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	SIRPD	Q9H106	197 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	DUSP21	Q9H596	190 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	TAS2R4	Q9NYW5	299 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	DHDH	Q9UQ10	334 aa		13.45	□□□□□ -0.26
TMC6-223	ENST00000592594	IGHV3OR16-10	A0A075B7F0	116 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	NKX6-3	A6NJ46	265 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	ANGPTL7	O43827	346 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	ALX3	O95076	343 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	NXPH2	O95156	264 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	SERPINA3	P01011	423 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	PPIAL4G	P0DN37	164 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	BCL3	P20749	454 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	GABRA2	P47869	451 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	POU3F4	P49335	361 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	WNT4	P56705	351 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	IL13RA1	P78552	427 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	RNLS	Q5VYX0	342 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	BTNL3	Q6UXE8	466 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	LHFPL2	Q6ZUX7	228 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	BCL6B	Q8N143	479 aa	Predicted RBP	13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	OR5D18	Q8NGL1	313 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	C8orf46	Q8TAG6	207 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	NANP	Q8TBE9	248 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	CEP19	Q96LK0	163 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	OR5M11	Q96RB7	305 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	DCTN5	Q9BTE1	182 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	MRI1	Q9BV20	369 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	CDCA4	Q9BXL8	241 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	VCX3B	Q9H321	246 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	RBFOX1	Q9NWB1	397 aa	Known RBP	13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	ZNF69	Q9UC07	566 aa		13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	RRP15	Q9Y3B9	282 aa	Known RBP	13.44	□□□□□ -0.26
TMC6-223	ENST00000592594	TRAV40	A0A0B4J280	105 aa		13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	PNMA8C	A0A1B0GUJ8	204 aa		13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	MAGEA13P	A6NCF6	341 aa		13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	PTGES3L	E9PB15	166 aa		13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	SULT1B1	O43704	296 aa		13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	RGS9	O75916	674 aa	Predicted RBP	13.43	□□□□□ -0.26
TMC6-223	ENST00000592594	INMT	O95050	263 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms