RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GABARAPO95166 117 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 CDRT1O95170 752 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 ZNF205O95201 554 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 IGHV2-70P01814 119 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 EGR1P18146 543 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 SDC2P34741 201 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 NR4A2P43354 598 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 RSU1Q15404 277 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 MICBQ29980 383 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 AWAT2Q6E213 333 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 SFRP4Q6FHJ7 346 aaPredicted RBP11.44□□□□□ -0.58
VMP1-210ENST00000589823 CRIP3Q6Q6R5 217 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 DNM1P46Q6ZS02 220 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 MUC20Q8N307 709 aaPredicted RBP11.44□□□□□ -0.58
VMP1-210ENST00000589823 C19orf18Q8NEA5 215 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 DEFB108BQ8NET1 73 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 OR6M1Q8NGM8 313 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 Q96MF0 132 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 NRIP2Q9BQI9 281 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 NAA50Q9GZZ1 169 aaKnown RBP11.44□□□□□ -0.58
VMP1-210ENST00000589823 RHOFQ9HBH0 211 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 PCDHB16Q9NRJ7 776 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 VWC2LB2RUY7 222 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 KDM4BO94953 1096 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 FSTL3O95633 263 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 CSTBP04080 98 aaKnown RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 MUC1P15941 1255 aaPredicted RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 BCL3P20749 454 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 HTR2CP28335 458 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 ERVK11-1P61568 191 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 VBP1P61758 197 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 NCS1P62166 190 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 HOXA4Q00056 320 aaPredicted RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 MXD1Q05195 221 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 ZMYND11Q15326 602 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 RAB11BQ15907 218 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 C1orf100Q5SVJ3 147 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 FIP1L1Q6UN15 594 aaKnown RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 GLIPR1L1Q6UWM5 242 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 SLC16A12Q6ZSM3 486 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 LRRC28Q86X40 367 aaPredicted RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 LYPD6Q86Y78 171 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 BATF2Q8N1L9 274 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
VMP1-210ENST00000589823 GFI1Q99684 422 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 GAL3ST1Q99999 423 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 WDR13Q9H1Z4 485 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 NLKQ9UBE8 527 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 GHRLQ9UBU3 117 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
VMP1-210ENST00000589823 IGHV3OR15-7A0A075B7D8 119 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 NOTOA8MTQ0 251 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 SLC17A2O00624 439 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 SLC22A1O15245 554 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 ZNF780AO75290 641 aaPredicted RBP11.42□□□□□ -0.58
VMP1-210ENST00000589823 UBBP0CG47 229 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 CD37P11049 281 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 PRKACAP17612 351 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 TGFBR1P36897 503 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 NPBWR2P48146 333 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 SERPINB10P48595 397 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 BMXP51813 675 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 TMBIM6P55061 237 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 OR10A3P58181 314 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 BLMHQ13867 455 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 GPR176Q14439 515 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 ZNF404Q494X3 552 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 TMEM155Q4W5P6 130 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 ACP7Q6ZNF0 438 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 C1QL2Q7Z5L3 287 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 FAM90A1Q86YD7 464 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 FAM58AQ8N1B3 248 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 SPICQ8N5J4 248 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 C12orf43Q96C57 262 aaKnown RBP11.42□□□□□ -0.58
VMP1-210ENST00000589823 BCL7BQ9BQE9 202 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 TMEM165Q9HC07 324 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 HES4Q9HCC6 221 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 RBFOX1Q9NWB1 397 aaKnown RBP11.42□□□□□ -0.58
VMP1-210ENST00000589823 IL36GQ9NZH8 169 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 STEAP1Q9UHE8 339 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 PCDHB10Q9UN67 800 aa11.42□□□□□ -0.58
VMP1-210ENST00000589823 SMIM30A4D0T7 59 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 IFITM5A6NNB3 132 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.41□□□□□ -0.58
VMP1-210ENST00000589823 NDUFA2O43678 99 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 HTR3BO95264 441 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 KNG1P01042 644 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 IL1AP01583 271 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 GYPAP02724 150 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms