RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CARTPTQ16568 116 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 SLC16A12Q6ZSM3 486 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 MOGAT3Q86VF5 341 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 SCCPDHQ8NBX0 429 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 RPL3LQ92901 407 aaKnown RBP13.56□□□□□ -0.24
ATG4D-205ENST00000586477 TIMD4Q96H15 378 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 PIMREGQ9BSJ6 248 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 MRI1Q9BV20 369 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 BPESC1Q9GZL8 116 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 CHODLQ9H9P2 273 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 PLGRKTQ9HBL7 147 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 C1orf123Q9NWV4 160 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 RNF7Q9UBF6 113 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 NPTNQ9Y639 398 aa13.56□□□□□ -0.24
ATG4D-205ENST00000586477 NOTOA8MTQ0 251 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 CLDN25C9JDP6 229 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 CDIPTO14735 213 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 NCR1O76036 304 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 HPXP02790 462 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 TMEM225BP0DP42 221 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
ATG4D-205ENST00000586477 POU3F4P49335 361 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
ATG4D-205ENST00000586477 PDZK1IP1Q13113 114 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 KCNJ8Q15842 424 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 CTF1Q16619 201 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 PRAMEF6Q5VXH4 476 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 FIP1L1Q6UN15 594 aaKnown RBP13.55□□□□□ -0.24
ATG4D-205ENST00000586477 PXT1Q8NFP0 134 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 TNFAIP8L1Q8WVP5 186 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 AQP3Q92482 292 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 CCL17Q92583 94 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 ORAI1Q96D31 301 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 FAM192AQ9GZU8 254 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 PPP1R3EQ9H7J1 279 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 TMEM106BQ9NUM4 274 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 UFSP2Q9NUQ7 469 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
ATG4D-205ENST00000586477 A8MV72 311 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-205ENST00000586477 TRAPPC2LH3BP13 241 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 SLC17A2O00624 439 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 NOS1APO75052 506 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-205ENST00000586477 CDRT1O95170 752 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 FSTL3O95633 263 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 COL8A2P25067 703 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 CFPP27918 469 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 HTR2CP28335 458 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 IL2RGP31785 369 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 SDC2P34741 201 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 PTGFRP43088 359 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 SERPINB10P48595 397 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 TMEM33P57088 247 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 MPPED2Q15777 294 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 FAM189A2Q15884 450 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 WDR82Q6UXN9 313 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 SLC25A26Q70HW3 274 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 WDR86Q86TI4 376 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 OR51F2Q8NH61 342 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 ISOC1Q96CN7 298 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 FGF23Q9GZV9 251 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-205ENST00000586477 METTL9Q9H1A3 318 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 SMURF1Q9HCE7 757 aa13.54□□□□□ -0.24
ATG4D-205ENST00000586477 RSL24D1Q9UHA3 163 aaKnown RBP13.54□□□□□ -0.24
ATG4D-205ENST00000586477 AK6Q9Y3D8 172 aaKnown RBP13.54□□□□□ -0.24
ATG4D-205ENST00000586477 IGKV1-27A0A075B6S5 117 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 AIPO00170 330 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CD37P11049 281 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 ADRA2CP18825 462 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 VBP1P61758 197 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 NCS1P62166 190 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 RAB11BQ15907 218 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 SMIM21Q3B7S5 101 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 DMRTC1Q5HYR2 192 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 C1orf100Q5SVJ3 147 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CYB5R2Q6BCY4 276 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 AWAT2Q6E213 333 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 FAM90A1Q86YD7 464 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CALHM1Q8IU99 346 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 POC1AQ8NBT0 407 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 TBC1D15Q8TC07 691 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 LRRC29Q8WV35 223 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 RAB1CQ92928 201 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 SPACA5Q96QH8 159 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CST11Q9H112 138 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 IL36GQ9NZH8 169 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 MRPS28Q9Y2Q9 187 aaKnown RBP13.53□□□□□ -0.24
ATG4D-205ENST00000586477 CEPT1Q9Y6K0 416 aa13.53□□□□□ -0.24
ATG4D-205ENST00000586477 TANC2Q9HCD6 1990 aa13.52□□□□□ -0.24
ATG4D-205ENST00000586477 IFITM5A6NNB3 132 aa13.52□□□□□ -0.25
ATG4D-205ENST00000586477 H3BUI4 141 aa13.52□□□□□ -0.25
ATG4D-205ENST00000586477 CDC14BO60729 498 aa13.52□□□□□ -0.25
ATG4D-205ENST00000586477 PLATP00750 562 aa13.52□□□□□ -0.25
ATG4D-205ENST00000586477 IFNA2P01563 188 aa13.52□□□□□ -0.25
ATG4D-205ENST00000586477 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.25
ATG4D-205ENST00000586477 PGA5P0DJD9 388 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms