RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 REEP6Q96HR9 211 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
TOP3A-215ENST00000583328 TEAD3Q99594 435 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 B9D2Q9BPU9 175 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 PAPOLGQ9BWT3 736 aaKnown RBP9.94□□□□□ -0.82
TOP3A-215ENST00000583328 CDCA4Q9BXL8 241 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 WNT10AQ9GZT5 417 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 ABCB10Q9NRK6 738 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 NLKQ9UBE8 527 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 DNAH9Q9NYC9 4486 aa9.94□□□□□ -0.82
TOP3A-215ENST00000583328 ZNF593O00488 134 aaPredicted RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 DUS4LO95620 317 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 ANXA2P07355 339 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 SPARCP09486 303 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 GABRB1P18505 474 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 COX7A1P24310 79 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 HTR1FP30939 366 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 CAPGP40121 348 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 CAPZA1P52907 286 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 AQP4P55087 323 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 ADARB1P78563 741 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 CD83Q01151 205 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 IL5RAQ01344 420 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 TMED1Q13445 227 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 ZNF691Q5VV52 312 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 KCTD8Q6ZWB6 473 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 SHFQ7M4L6 423 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 BCDIN3DQ7Z5W3 292 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 TIGD4Q8IY51 512 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 ENTHD1Q8IYW4 607 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 ZNRF1Q8ND25 227 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 SETD9Q8NE22 299 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 SGK3Q96BR1 496 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 CNN2Q99439 309 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 RTL8AQ9BWD3 113 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 SP140LQ9H930 580 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 DNAJC27Q9NZQ0 273 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 WARS2Q9UGM6 360 aaKnown RBP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 PITPNC1Q9UKF7 332 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.93□□□□□ -0.82
TOP3A-215ENST00000583328 TCF19Q9Y242 345 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 RHBDD3Q9Y3P4 386 aa9.93□□□□□ -0.82
TOP3A-215ENST00000583328 A0A1W2PPH5 198 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 TCRBV4S1A1TA0A5B7 111 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 A6NDX4 124 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 SNTNA6NMZ2 147 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 OR2AT4A6NND4 320 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 VGLL3A8MV65 326 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 SELENOFO60613 162 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 ALDOBP05062 364 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 PSKH1P11801 424 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 GLRA1P23415 457 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 CFL1P23528 166 aaKnown RBP9.92□□□□□ -0.82
TOP3A-215ENST00000583328 HOXD3P31249 432 aaPredicted RBP9.92□□□□□ -0.82
TOP3A-215ENST00000583328 VHLP40337 213 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 CX3CR1P49238 355 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 GSK3AP49840 483 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 SNCBQ16143 134 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 GFOD2Q3B7J2 385 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 LHFPL4Q7Z7J7 247 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 CSNK2A3Q8NEV1 391 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 RHOXF1Q8NHV9 184 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 RPS4Y2Q8TD47 263 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 Q96MT0 163 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 HSPE1-MOB4S4R3N1 261 aa9.92□□□□□ -0.82
TOP3A-215ENST00000583328 hCG_38984A0A1B0GV85 526 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 hCG_1809904A0A1W2PP81 198 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 A0A1W2PPE2 198 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 A0A1W2PR64 198 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 A0A1W2PRV1 198 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 TMEM210A6NLX4 147 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 ZNF878C9JN71 531 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 ENTPD6O75354 484 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 RHBDL1O75783 438 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 CLIC3O95833 236 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 PSG2P11465 335 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 HSD11B1P28845 292 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 SLC15A1P46059 708 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 HSPA13P48723 471 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 BLCAPP62952 87 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 GRB2P62993 217 aaKnown RBP9.91□□□□□ -0.82
TOP3A-215ENST00000583328 EIF2B1Q14232 305 aaKnown RBP9.91□□□□□ -0.82
TOP3A-215ENST00000583328 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 IZUMO2Q6UXV1 221 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 Q6ZS46 218 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 FAM57BQ71RH2 274 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 FTMTQ8N4E7 242 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 OTOSQ8NHW6 89 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 TFAP2CQ92754 450 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 DPF1Q92782 380 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 RNF170Q96K19 258 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 MNTQ99583 582 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 YIPF3Q9GZM5 350 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 ADGRL4Q9HBW9 690 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 C19orf12Q9NSK7 152 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 CLN6Q9NWW5 311 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms