RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 LIN54Q6MZP7 749 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 C11orf88Q6PI97 169 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RHOUQ7L0Q8 258 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 DOK3Q7L591 496 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SLC36A1Q7Z2H8 476 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF584Q8IVC4 421 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PAQR4Q8N4S7 273 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR1K1Q8NGR3 316 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MBD3L2Q8NHZ7 208 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NUDCD2Q8WVJ2 157 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 DMRTA2Q96SC8 542 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR51B6Q9H340 312 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 POFUT1Q9H488 388 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 BANF2Q9H503 90 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GLS2Q9UI32 602 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MRPS28Q9Y2Q9 187 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 UBE2QL1A1L167 161 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF736B4DX44 427 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GNB3P16520 340 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CRYGSP22914 178 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR3A4PP47883 348 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SCRN3Q0VDG4 424 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB35Q15286 201 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CDNFQ49AH0 187 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TRAPPC6BQ86SZ2 158 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 BVESQ8NE79 360 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TMPRSS13Q9BYE2 586 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SELENOIQ9C0D9 397 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PRORYQ9H606 182 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GP6Q9HCN6 339 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 IFT46Q9NQC8 304 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GLRX2Q9NS18 164 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 POLEQ07864 2286 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR6C6A6NF89 314 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PCP4L1A6NKN8 68 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CCSO14618 274 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LCATP04180 440 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CELA3BP08861 270 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 BMP5P22003 454 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CAPZA1P52907 286 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAP2BP61225 183 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LRRC37A5PQ49AS3 106 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PGAP1Q75T13 922 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FJX1Q86VR8 437 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LYPD6Q86Y78 171 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 BCL2L2Q92843 193 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NICN1Q9BSH3 213 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OPN4Q9UHM6 478 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 COL12A1Q99715 3063 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 USP24Q9UPU5 2620 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CFAP46Q8IYW2 2715 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 C5orf49A4QMS7 147 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB27BO00194 218 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 KCNAB3O43448 404 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 WDR1O75083 606 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 AGFG2O95081 481 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CGAP01215 116 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 IL2RAP01589 272 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GLI4P10075 376 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FAHP16930 419 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 STK11Q15831 433 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB12Q6IQ22 244 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 Q6ZT83 130 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR5AS1Q8N127 324 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TMEM104Q8NE00 496 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SCPEP1Q9HB40 452 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RHBDD3Q9Y3P4 386 aa10.97□□□□□ -0.65
CDK5RAP3-217ENST00000580287 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 A0A1W2PP11 408 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SULT1C2O00338 296 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PRRG2O14669 202 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RP2O75695 350 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CRTAPO75718 401 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR2A4O95047 310 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CD37P11049 281 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB6AP20340 208 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CTSSP25774 331 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 S100A11P31949 105 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PCBD1P61457 104 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SEC61A1P61619 476 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SORDQ00796 357 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR2A2Q6IF42 318 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ATRAIDQ6UW56 229 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PCSK4Q6UW60 755 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MDP1Q86V88 176 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CXorf67Q86X51 503 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FAM219AQ8IW50 185 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 BPIFB2Q8N4F0 458 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR6K3Q8NGY3 331 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SPTSSAQ969W0 71 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SGK3Q96BR1 496 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR2A7Q96R45 310 aa10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ELL3Q9HB65 397 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-217ENST00000580287 IGSF10Q6WRI0 2623 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms