RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 VCX3BQ9H321 246 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 SNTG1Q9NSN8 517 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 NLKQ9UBE8 527 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 DIMT1Q9UNQ2 313 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 CAB39Q9Y376 341 aaPredicted RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 EXOSC1Q9Y3B2 195 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 PRKDCP78527 4128 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 TRBV2A0A0J9YWF9 115 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 A0A1B0GUS0 222 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 FAM181BA6NEQ2 426 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OR2AT4A6NND4 320 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 J3QT63 122 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 NDUFB3O43676 98 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 ENSAO43768 121 aaKnown RBP13.23□□□□□ -0.29
VAPA-204ENST00000577901 ECDO95905 644 aaPredicted RBP13.23□□□□□ -0.29
VAPA-204ENST00000577901 LIPFP07098 398 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OCM2P0CE71 109 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OCMP0CE72 109 aaPredicted RBP13.23□□□□□ -0.29
VAPA-204ENST00000577901 ETV1P50549 477 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
VAPA-204ENST00000577901 STUMQ69YW2 141 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 POC1AQ8NBT0 407 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OR4F5Q8NH21 305 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 OR5AK2Q8NH90 309 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
VAPA-204ENST00000577901 WFDC12Q8WWY7 111 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 SEH1LQ96EE3 360 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 MED30Q96HR3 178 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 PKIBQ9C010 78 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 BEX1Q9HBH7 125 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
VAPA-204ENST00000577901 GPR37O15354 613 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 NOS1APO75052 506 aaPredicted RBP13.22□□□□□ -0.29
VAPA-204ENST00000577901 ZFPL1O95159 310 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 CRYBA1P05813 215 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 PRKACBP22694 351 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 RAG2P55895 527 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 FGF12P61328 243 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 CCDC58Q4VC31 144 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 GPR157Q5UAW9 335 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 UTS2BQ765I0 119 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 PNLDC1Q8NA58 520 aaKnown RBP13.22□□□□□ -0.29
VAPA-204ENST00000577901 NPRL2Q8WTW4 380 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 FBLIM1Q8WUP2 373 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 NRG4Q8WWG1 115 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 ST8SIA4Q92187 359 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 GGHQ92820 318 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 ADAT3Q96EY9 351 aaPredicted RBP13.22□□□□□ -0.29
VAPA-204ENST00000577901 BORCS8Q96FH0 119 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 NEK6Q9HC98 313 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 SMURF1Q9HCE7 757 aa13.22□□□□□ -0.29
VAPA-204ENST00000577901 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
VAPA-204ENST00000577901 E9PI62 339 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 SYNGR1O43759 233 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ACAA1P09110 424 aaPredicted RBP13.21□□□□□ -0.29
VAPA-204ENST00000577901 PGA5P0DJD9 388 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 PIPP12273 146 aaPredicted RBP13.21□□□□□ -0.29
VAPA-204ENST00000577901 ATF1P18846 271 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 MPZP25189 248 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 GABRA2P47869 451 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ATP1B3P54709 279 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 BPIFB3P59826 476 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ST3GAL4Q11206 333 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 IL24Q13007 206 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 IKZF1Q13422 519 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 SMIM21Q3B7S5 101 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 RPL22L1Q6P5R6 122 aaKnown RBP13.21□□□□□ -0.29
VAPA-204ENST00000577901 FIP1L1Q6UN15 594 aaKnown RBP13.21□□□□□ -0.29
VAPA-204ENST00000577901 Q6YL49 198 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ZNF788Q6ZQV5 615 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 BTN2A1Q7KYR7 527 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ANGPTL5Q86XS5 388 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 CALHM1Q8IU99 346 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 FAM216BQ8N7L0 139 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 DNAAF1Q8NEP3 725 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 BPIFB6Q8NFQ5 453 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 ANGPTL6Q8NI99 470 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 PDCD1LG2Q9BQ51 273 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 NOX4Q9NPH5 578 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 PLCXD1Q9NUJ7 323 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.29
VAPA-204ENST00000577901 C22orf46C9J442 243 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 NXPH2O95156 264 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 CYB5AP00167 134 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 PSG2P11465 335 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 RBP2P50120 134 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
VAPA-204ENST00000577901 AQP4P55087 323 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 MTCP1P56278 107 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 RELBQ01201 579 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 OR2G6Q5TZ20 316 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 OLFML2AQ68BL7 652 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms