RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SRMP19623 302 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 USF1P22415 310 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 TUBG1P23258 451 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 TNFSF4P23510 183 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SOX2P48431 317 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 UBE2V2Q15819 145 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 RGS21Q2M5E4 152 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 HFEQ30201 348 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 STEAP3Q658P3 488 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 MZT2AQ6P582 158 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CRIP3Q6Q6R5 217 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 LYPD2Q6UXB3 125 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CLEC9AQ6UXN8 241 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 Q6ZSR3 168 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 LRRC28Q86X40 367 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 LYPD6Q86Y78 171 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 C1orf174Q8IYL3 243 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 ZDHHC23Q8IYP9 409 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CENPSQ8N2Z9 138 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 GCSAMQ8N6F7 178 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 GDPD1Q8N9F7 314 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 PLPP7Q8NBV4 271 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 DEFB108BQ8NET1 73 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 OR1M1Q8NGA1 313 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 OR8S1Q8NH09 359 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 GPR148Q8TDV2 347 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 RFT1Q96AA3 541 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 MSI2Q96DH6 328 aaKnown RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CYYR1Q96J86 154 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CEP19Q96LK0 163 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SPACA5Q96QH8 159 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 EGLN1Q9GZT9 426 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 COMMD4Q9H0A8 199 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 WDR13Q9H1Z4 485 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 RGCCQ9H4X1 137 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 OPA3Q9H6K4 179 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 TUBG2Q9NRH3 451 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 MXRA5Q9NR99 2828 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 hCG_1807616A0A1W2PRN6 198 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 IFITM5A6NNB3 132 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 AIPO00170 330 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CDIPTO14735 213 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 PDCD5O14737 125 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SYNGR1O43759 233 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 GMDSO60547 372 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 HPGDSO60760 199 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 PTBP3O95758 552 aaKnown RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CST4P01036 141 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 IGHV2-5P01817 119 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CSF3P09919 207 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 UBCP0CG48 685 aaKnown RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CALCBP10092 127 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 GNALP38405 381 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SRP9P49458 86 aaKnown RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CEBPDP49716 269 aaPredicted RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SCAND1P57086 179 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 LMO4P61968 165 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 BTG1P62324 171 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 LOXL1Q08397 574 aaPredicted RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 RIPPLY1Q0D2K3 151 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 TMEM42Q69YG0 159 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 FAM166AQ6J272 317 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF529Q6P280 563 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CNIH2Q6PI25 160 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 WDR82Q6UXN9 313 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 DOK3Q7L591 496 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 ANGPTL5Q86XS5 388 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CALHM1Q8IU99 346 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SNX29P2Q8IUI4 249 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF676Q8N7Q3 588 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SCCPDHQ8NBX0 429 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 OR51A2Q8NGJ7 313 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 OR13C3Q8NGS6 347 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 OR13C9Q8NGT0 318 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SETD6Q8TBK2 473 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 LRRC29Q8WV35 223 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 FGGYQ96C11 551 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 DIRAS2Q96HU8 199 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 RNF170Q96K19 258 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 DIRC2Q96SL1 478 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 GAL3ST1Q99999 423 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 MRI1Q9BV20 369 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SP140LQ9H930 580 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 PLEKHA1Q9HB21 404 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 MYOZ1Q9NP98 299 aaPredicted RBP6.62□□□□□ -1.35
CCDC40-215ENST00000576033 IL36RNQ9UBH0 155 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 CTSZQ9UBR2 303 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 ADAM30Q9UKF2 790 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 SPATA2Q9UM82 520 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 NPTNQ9Y639 398 aa6.62□□□□□ -1.35
CCDC40-215ENST00000576033 NAV3Q8IVL0 2385 aa6.61□□□□□ -1.35
CCDC40-215ENST00000576033 TRAV8-7A0A075B6U6 113 aa6.61□□□□□ -1.35
CCDC40-215ENST00000576033 FAM230AA0A1W2PPH8 454 aa6.61□□□□□ -1.35
CCDC40-215ENST00000576033 A0A1W2PPK0 400 aa6.61□□□□□ -1.35
CCDC40-215ENST00000576033 PQLC2LA1A4F0 135 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms