RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ELL3Q9HB65 397 aaPredicted RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 FAM24AA6NFZ4 105 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 AHSA1O95433 338 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 IGHMP01871 453 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 DBHP09172 617 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 NR2C1P13056 603 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 RNF4P78317 190 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 JOSD1Q15040 202 aaPredicted RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 PRTGQ2VWP7 1150 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 PHLDA2Q53GA4 152 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 DNM1P34Q6PK57 102 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 STT3BQ8TCJ2 826 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 OR14J1Q9UGF5 321 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 PGCP20142 388 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 FGF7P21781 194 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 IL12BP29460 328 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
SMG6-215ENST00000574501 RRADP55042 308 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 FXYD4P59646 89 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 RAB4BP61018 213 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMG6-215ENST00000574501 TMEM187Q14656 261 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 OOSP2Q86WS3 158 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 OR8B12Q8NGG6 310 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 PTPMT1Q8WUK0 201 aaPredicted RBP12.62□□□□□ -0.39
SMG6-215ENST00000574501 DDA1Q9BW61 102 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 TBL1XR1Q9BZK7 514 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
SMG6-215ENST00000574501 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 CCDC187A0A096LP49 1063 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 A6NIZ1 184 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 SOX15O60248 233 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 TMEM225BP0DP42 221 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 GABRR1P24046 479 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 RAP1BP61224 184 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 TNFRSF9Q07011 255 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
SMG6-215ENST00000574501 C1orf87Q8N0U7 546 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 RTN4IP1Q8WWV3 396 aaPredicted RBP12.62□□□□□ -0.39
SMG6-215ENST00000574501 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 NUDT22Q9BRQ3 303 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
SMG6-215ENST00000574501 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 IL18BPO95998 194 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 CTNNB1P35222 781 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 NKAIN1Q4KMZ8 207 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 ABCA11PQ4W5N1 156 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 ZNF542PQ5EBM4 170 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 ZNF880Q6PDB4 577 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 SPRED2Q7Z698 418 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 FAM89BQ8N5H3 189 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 FAM86C1Q9NVL1 165 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 SLC7A11Q9UPY5 501 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 MYO7BQ6PIF6 2116 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 STMND1H3BQB6 276 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 ONECUT2O95948 504 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 AMBPP02760 352 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 SFTPCP11686 197 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 CEACAM6P40199 344 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 ZNF121P58317 390 aaPredicted RBP12.61□□□□□ -0.39
SMG6-215ENST00000574501 RPL23AP62750 156 aaKnown RBP12.61□□□□□ -0.39
SMG6-215ENST00000574501 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 HAS2Q92819 552 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 LIN37Q96GY3 246 aaPredicted RBP12.61□□□□□ -0.39
SMG6-215ENST00000574501 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
SMG6-215ENST00000574501 FAM221AA4D161 298 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 FOXI3A8MTJ6 420 aaPredicted RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 DUSP1P28562 367 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 CDAP32320 146 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 OPRM1P35372 400 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 RELQ04864 619 aaPredicted RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 KISS1Q15726 138 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 TMEM171Q8WVE6 324 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 BMFQ96LC9 184 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 PITPNC1Q9UKF7 332 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 HSF4Q9ULV5 492 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 ZNF850A8MQ14 1090 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 MSTNO14793 375 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 HSPB1P04792 205 aaKnown RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 MYOGP15173 224 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 RUNX1Q01196 453 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms