RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ADH4P08319 380 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 BCL3P20749 454 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 NPBWR2P48146 333 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 SRP9P49458 86 aaKnown RBP20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 ART1P52961 327 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 BIVMQ86UB2 503 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 MKXQ8IYA7 352 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 CMTM4Q8IZR5 234 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 DIRC2Q96SL1 478 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 IL19Q9UHD0 177 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 ADAM30Q9UKF2 790 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 DCHS2Q6V1P9 2916 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 F8VVB4 439 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 F8VWA3 439 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CDC14BO60729 498 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 HTR3BO95264 441 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 PTBP3O95758 552 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 MPIG6BO95866 241 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 APOA1P02647 267 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 DANCRP0C864 163 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 COL8A1P27658 744 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 AGAP6Q5VW22 663 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 OR2W3Q7Z3T1 314 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 LRRC28Q86X40 367 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 SAXO1Q8IYX7 474 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 KCNG3Q8TAE7 436 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 SOSTQ9BQB4 213 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CST11Q9H112 138 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 MS4A5Q9H3V2 200 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CBLN4Q9NTU7 201 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 TPD52L2O43399 206 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CD8AP01732 235 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 RANBP1P43487 201 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 METAP1DQ6UB28 335 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 MOGAT3Q86VF5 341 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 TMEM200AQ86VY9 491 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 OR8H2Q8N162 312 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CELF2-AS1Q8N7Q2 184 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 MINDY2Q8NBR6 621 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 CLEC4MQ9H2X3 399 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 RBFOX1Q9NWB1 397 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 C1orf123Q9NWV4 160 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 IL36GQ9NZH8 169 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 FBLN5Q9UBX5 448 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 RAB22AQ9UL26 194 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 POLDIP2Q9Y2S7 368 aa20.34■□□□□ 0.85
ATPAF1-213ENST00000574428 TRAPPC2LH3BP13 241 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 CSTBP04080 98 aaKnown RBP20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 CD55P08174 381 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 MGMTP16455 207 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 C11orf71Q6IPW1 123 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 WDR82Q6UXN9 313 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 OR4M1Q8NGD0 313 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 TMEM59Q9BXS4 323 aa20.33■□□□□ 0.84
ATPAF1-213ENST00000574428 USP9YO00507 2555 aaPredicted RBP20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 hCG_1807616A0A1W2PRN6 198 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 KDM4BO94953 1096 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 RAB6AP20340 208 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 HOXA4Q00056 320 aaPredicted RBP20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 BAK1Q16611 211 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 DTX2Q86UW9 622 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 POC5Q8NA72 575 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 PTX4Q96A99 478 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 CMTM3Q96MX0 182 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 VRK1Q99986 396 aaPredicted RBP20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 ATG5Q9H1Y0 275 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 ABCG5Q9H222 651 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 EXTL2Q9UBQ6 330 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 LAMP3Q9UQV4 416 aa20.32■□□□□ 0.84
ATPAF1-213ENST00000574428 ZNF780AO75290 641 aaPredicted RBP20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 GMFBP60983 142 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 TLE4Q04727 773 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 GPR176Q14439 515 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 FAM209AQ5JX71 171 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 GDPD1Q8N9F7 314 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 NICN1Q9BSH3 213 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 SELENOIQ9C0D9 397 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 FN3KRPQ9HA64 309 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 DECR2Q9NUI1 292 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 CACNA1DQ01668 2161 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 RAI1Q7Z5J4 1906 aaPredicted RBP20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 AKR7A2O43488 359 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 GATA4P43694 442 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 PPOXP50336 477 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 PYDC2Q56P42 97 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 IZUMO1Q8IYV9 350 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 TRAF4Q9BUZ4 470 aaPredicted RBP20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 EGLN1Q9GZT9 426 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 LPAR5Q9H1C0 372 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 SAP30LQ9HAJ7 183 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 GCM1Q9NP62 436 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 TREM2Q9NZC2 230 aa20.31■□□□□ 0.84
ATPAF1-213ENST00000574428 ARFGEF3Q5TH69 2177 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 CHD3Q12873 2000 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 PGA5P0DJD9 388 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 IL7P13232 177 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 GTF2F2P13984 249 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 PMELP40967 661 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 RPS27AP62979 156 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 TESK1Q15569 626 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms