RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TRMT10AQ8TBZ6 339 aaKnown RBP17.21■□□□□ 0.35
CHRNB1-206ENST00000574054 HEXA-AS1Q9H8Q6 139 aa17.21■□□□□ 0.35
CHRNB1-206ENST00000574054 hCG_1809904A0A1W2PP81 198 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 A0A1W2PPE2 198 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 FAM230AA0A1W2PPH8 454 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 A0A1W2PR64 198 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 A0A1W2PRV1 198 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 DYNC1I1O14576 645 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 NOS1APO75052 506 aaPredicted RBP17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 APOL3O95236 402 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 PIPP12273 146 aaPredicted RBP17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 CCL3L1P16619 93 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 BMXP51813 675 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 EFNB1P98172 346 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 C2orf68Q2NKX9 166 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 KDM4DQ6B0I6 523 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 SSX6Q7RTT6 188 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 ANGPTL5Q86XS5 388 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 AJUBAQ96IF1 538 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 PLEKHA1Q9HB21 404 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 USE1Q9NZ43 259 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 ENOPH1Q9UHY7 261 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 SIGLEC9Q9Y336 463 aa17.2■□□□□ 0.34
CHRNB1-206ENST00000574054 DHRS7CA6NNS2 312 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 FASP25445 335 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 LGALS4P56470 323 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 ERVFRD-1P60508 538 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 ZNF273Q14593 569 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 ZNF782Q6ZMW2 699 aaPredicted RBP17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 AMIGO2Q86SJ2 522 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 ASCC1Q8N9N2 400 aaKnown RBP17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 OR4C13Q8NGP0 309 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 PPP1R35Q8TAP8 253 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 WARS2Q9UGM6 360 aaKnown RBP17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 SLC7A11Q9UPY5 501 aa17.19■□□□□ 0.34
CHRNB1-206ENST00000574054 TK1P04183 234 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 MPZP25189 248 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 CALHM1Q8IU99 346 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 OR10H4Q8NGA5 316 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 CIB1Q99828 191 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 GABARAPL1Q9H0R8 117 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 MEGF9Q9H1U4 602 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 HES4Q9HCC6 221 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 AP4S1Q9Y587 144 aa17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 PRKDCP78527 4128 aaKnown RBP17.18■□□□□ 0.34
CHRNB1-206ENST00000574054 A0A1W2PQL4 384 aaPredicted RBP17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 SYT7O43581 403 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 INMTO95050 263 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 ATP6V1E1P36543 226 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 IL24Q13007 206 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 C1orf146Q5VVC0 180 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 CATSPERDQ86XM0 798 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 PKIBQ9C010 78 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 RIBC2Q9H4K1 309 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 RAB18Q9NP72 206 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 FBLN5Q9UBX5 448 aa17.17■□□□□ 0.34
CHRNB1-206ENST00000574054 MEX3AA1L020 520 aaKnown RBP17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 METTL15A6NJ78 407 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 CSF1P09603 554 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 CCL1P22362 96 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 HTR1FP30939 366 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 COL10A1Q03692 680 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 BNIP1Q12981 228 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 AANATQ16613 207 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 PLA1AQ53H76 456 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 Q6ZSR3 168 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 Q6ZTK2 550 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 C11orf42Q8N5U0 333 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 ADI1Q9BV57 179 aa17.16■□□□□ 0.34
CHRNB1-206ENST00000574054 K7N7A8 449 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 GATBO75879 557 aaKnown RBP17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 OR2T7P0C7T2 308 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 FCGR1AP12314 374 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 POLR2IP36954 125 aaKnown RBP17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 EDDM3BP56851 147 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 ERVK11-1P61568 191 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 HERPUD1Q15011 391 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 UBE2V2Q15819 145 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 LHFPL4Q7Z7J7 247 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 C1QL4Q86Z23 238 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 SLAMF9Q96A28 289 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 CEP19Q96LK0 163 aa17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 NKX3-1Q99801 234 aaPredicted RBP17.15■□□□□ 0.34
CHRNB1-206ENST00000574054 RASSF2P50749 326 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 EFNB2P52799 333 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 GDPD3Q7L5L3 318 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 C11orf44Q8N8P7 122 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 OR2T6Q8NHC8 308 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 NPFFR1Q9GZQ6 430 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 MTCH1Q9NZJ7 389 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 FOXJ3Q9UPW0 622 aa17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 TET2Q6N021 2002 aaPredicted RBP17.14■□□□□ 0.33
CHRNB1-206ENST00000574054 IGKV1-27A0A075B6S5 117 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 LOC107986453A0A1B0GWG9 222 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 F8VVB4 439 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 F8VWA3 439 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 CHST1O43916 411 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 SULT1C4O75897 302 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 ARG1P05089 322 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 CHRM2P08172 466 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms