RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PRSS12P56730 875 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 TSPO2Q5TGU0 170 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 FOXL2NBQ6ZUU3 175 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 C15orf54Q8N8G6 183 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 OR2AE1Q8NHA4 323 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 HIST1H2BAQ96A08 127 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 FBXO17Q96EF6 278 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 KPTNQ9Y664 436 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 MTCH2Q9Y6C9 303 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 DIRAS3O95661 229 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 OR5AC1P0C628 307 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 SNCAP37840 140 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 FHITP49789 147 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 RAB5BP61020 215 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 TMEM187Q14656 261 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 LYZL2Q7Z4W2 148 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 C20orf196Q8IYI0 205 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 DYRK2Q92630 601 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 FAM212BQ9NTI7 297 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 IGKV1-27A0A075B6S5 117 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF850A8MQ14 1090 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 BCAT2O15382 392 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 DHHO43323 396 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 CELA2AP08217 269 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 ACAA1P09110 424 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 GLI4P10075 376 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 PAX6P26367 422 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 TMEM123Q8N131 208 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 MARS2Q96GW9 593 aaKnown RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 NAA11Q9BSU3 229 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 NXT1Q9UKK6 140 aaKnown RBP16.61■□□□□ 0.25
SCARF1-206ENST00000573852 EDARQ9UNE0 448 aa16.61■□□□□ 0.25
SCARF1-206ENST00000573852 E5RGE8 158 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 TOX3O15405 576 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-206ENST00000573852 XRCC2O43543 280 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF728P0DKX0 622 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 NR2C1P13056 603 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 PNLIPP16233 465 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 PTAFRP25105 342 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 AFF3P51826 1226 aaKnown RBP16.6■□□□□ 0.25
SCARF1-206ENST00000573852 SHBQ15464 509 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 BRICD5Q6PL45 260 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 PLXDC2Q6UX71 529 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 NAA60Q9H7X0 242 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 RARRES3Q9UL19 164 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 KCNIP3Q9Y2W7 256 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 NSG2Q9Y328 171 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 FAM230AA0A1W2PPH8 454 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 RSU1Q15404 277 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-206ENST00000573852 C10orf35Q96D05 121 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 METTL9Q9H1A3 318 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 NECAP2Q9NVZ3 263 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 ZDHHC8Q9ULC8 765 aa16.6■□□□□ 0.25
SCARF1-206ENST00000573852 DANCRP0C864 163 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 FKBP2P26885 142 aaKnown RBP16.59■□□□□ 0.25
SCARF1-206ENST00000573852 FXYD4P59646 89 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF616Q08AN1 781 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 TGIF1Q15583 401 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 AWAT1Q58HT5 328 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 TMEM156Q8N614 296 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 GNRHR2Q96P88 292 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 IP6K3Q96PC2 410 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 FAM221AA4D161 298 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 NPIPA2E9PIF3 369 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 NPIPA3F8WFD2 350 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 SNRNP70P08621 437 aaKnown RBP16.59■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF44P15621 663 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 GUK1Q16774 197 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 PHLDA2Q53GA4 152 aa16.59■□□□□ 0.25
SCARF1-206ENST00000573852 A0A1W2PQM1 296 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 C7orf77A4D0Y5 90 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 C1QL1O75973 258 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 SEC11BP0C7V7 166 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 UCP2P55851 309 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 ABCA11PQ4W5N1 156 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 GUSBP11Q6P575 273 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.58■□□□□ 0.25
SCARF1-206ENST00000573852 SPTSSAQ969W0 71 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 REEP6Q96HR9 211 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 HSF4Q9ULV5 492 aa16.58■□□□□ 0.25
SCARF1-206ENST00000573852 C1orf196B1AJZ1 125 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 PRSS44E7EML9 344 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 TP53I11O14683 189 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 HOXB1P14653 301 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-206ENST00000573852 DAOP14920 347 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 HMGN3Q15651 99 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 ZIC4Q8N9L1 334 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 OR52M1Q8NGK5 317 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 ISOC2Q96AB3 205 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 GALNT14Q96FL9 552 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 C20orf24Q9BUV8 137 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 SH3BGRL3Q9H299 93 aa16.58■□□□□ 0.24
SCARF1-206ENST00000573852 FOXD3Q9UJU5 478 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-206ENST00000573852 SDK2Q58EX2 2172 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 SHANK1Q9Y566 2161 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 CBR1P16152 277 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 CHATP28329 748 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 S100A12P80511 92 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 DNASE2BQ8WZ79 361 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms