RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FAM122CQ6P4D5 195 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 AAED1Q7RTV5 226 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 FNDC9Q8TBE3 224 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 MRPL24Q96A35 216 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 CMSS1Q9BQ75 279 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TLNRD1Q9H1K6 362 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TREM1Q9NP99 234 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 LPAR3Q9UBY5 353 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 FAM96BQ9Y3D0 163 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 IGKV1-12A0A0C4DH73 117 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF716A6NP11 495 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 FBXO24O75426 580 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 IGKV1D-12P01611 117 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 PIGPP57054 158 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 PSG4Q00888 419 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CEACAM16Q2WEN9 425 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SVBPQ8N300 66 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 OR10D3Q8NH80 312 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ABHD3Q8WU67 409 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 NTNG2Q96CW9 530 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CPNE2Q96FN4 548 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 MARS2Q96GW9 593 aaKnown RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SGCZQ96LD1 299 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SF3B5Q9BWJ5 86 aaKnown RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SMIM3Q9BZL3 60 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SMOC1Q9H4F8 434 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 TAF9BQ9HBM6 251 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 MEMO1Q9Y316 297 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 LSM5Q9Y4Y9 91 aaKnown RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 NRASP01111 189 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 FCGR3AP08637 254 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 HKR1P10072 659 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ICAM2P13598 275 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SRD5A2P31213 254 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF92Q03936 586 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 SCRN3Q0VDG4 424 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 MST1LQ2TV78 715 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CCDC157Q569K6 752 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 TRIM61Q5EBN2 209 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 RTL6Q6ICC9 239 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CLEC9AQ6UXN8 241 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CBLN2Q8IUK8 224 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 FBXL14Q8N1E6 418 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 OR10AD1Q8NGE0 317 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ADAMTS17Q8TE56 1095 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF845Q96IR2 970 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 FOXB1Q99853 325 aa9.75□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF629Q9UEG4 869 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-212ENST00000573126 CRYM-AS1A6NIL9 109 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 K7EPK0 472 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 AGPAT2O15120 278 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CA11O75493 328 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CST2P09228 141 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 NME2P22392 152 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CLDN15P56746 228 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 PPA1Q15181 289 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CNN3Q15417 329 aaKnown RBP9.74□□□□□ -0.85
RPAIN-212ENST00000573126 STK11Q15831 433 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 PHLDA2Q53GA4 152 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 GGNBP1Q5YKI7 109 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 H3F3CQ6NXT2 135 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 LDLRAD3Q86YD5 345 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 ESX1Q8N693 406 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 PCDHB16Q9NRJ7 776 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 DEPPQ9NTK1 212 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 DNAJB11Q9UBS4 358 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 GPR179Q6PRD1 2367 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CCDC163A0A0D9SF12 145 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 LRRC3CA6NJW4 275 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
RPAIN-212ENST00000573126 CHATP28329 748 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 RPL12P30050 165 aaKnown RBP9.74□□□□□ -0.85
RPAIN-212ENST00000573126 LPAL2Q16609 132 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 PPP1R32Q7Z5V6 425 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 ST3GAL6Q9Y274 331 aa9.74□□□□□ -0.85
RPAIN-212ENST00000573126 OR6C6A6NF89 314 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 MED6O75586 246 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 RFC3P40938 356 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 LPAR6P43657 344 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 ID4P47928 161 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 TRA2AQ13595 282 aaKnown RBP eCLIP9.73□□□□□ -0.85
RPAIN-212ENST00000573126 CDCP2Q5VXM1 449 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 NSUN5P2Q63ZY6 315 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 SLC23A3Q6PIS1 610 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 SLC22A25Q6T423 547 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 SKA3Q8IX90 412 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 CPT1CQ8TCG5 803 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 RTN4IP1Q8WWV3 396 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-212ENST00000573126 PIGCQ92535 297 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 OR2H1Q9GZK4 316 aa9.73□□□□□ -0.85
RPAIN-212ENST00000573126 PARP12Q9H0J9 701 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms